| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5341 |
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| Symbol | |
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| ID | 8228952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6452653 |
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| End bp | 6454626 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644933186 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003089699 |
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| Protein GI | 255039078 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAC TTCTCCTTCC GCTGCTCTCC CTGCTTGTAT TTCCCACCCT GGCCCAGGAG
CCGTCGTCTT TGACCGACCG AACTTTCCAG CTTGGCGAAG TGCGGGTCTC CGGAATCAGC
CATCGCGACA GCCTTTCGTC GCGCCTCACC TACCGCACGA TCGAACAATT CAGCCGCAAC
GATCTTTCCA ATGCACTGAA CATTCTACCC GGCGTGACGA TGGCGAACGT CGGCCCACGC
AACGAGTCGG TGGTGTATGT ACGCGGGTTC GACCTGCGCC AGGTGCCGGT TTACATCGAC
GGCGTGCCCG TGTACGTGCC GTACGACGGC TATGTGGACA AGGGCCGCTT CACGACCTTC
GACCTGGCCG AAGTGAATGT TTCCAAAGGC TTTGCTTCGA TATTGTACGG CGCCAACACA
ATGGGCGGCG CGATCAACCT CGTGTCGCGA AAGCCGGTAA ATAAGTTCGA GATCAATGGT
CGCGCCGGTG TTTTCAGTGG AGGCGGCTAC CGCTGGAATG TGAACGCCGG CTCGCGTTTA
GGCAAATTCT TCTACCAGGT CGGCGCTTCG CAATTAAAAC AGGATACTTA CCCGCTTTCG
GCCGATTTCA AACCCCGCAA ATTCCAGCAA ACCGACGACC GGGAAAATGC CTACCGCGAC
GATCTGAAAT TCAGTGTCAA AGCCGGGTTC ACGCCCAATG CAACGGACGA ATATGTGATC
GGCTACATCA ACCAGCACGG CGAAAAAGGT ACGCCGCCGT ACGTGGGCGA CGACTCCAAA
ATCACCACGC GCTTCTGGAA ATGGCCGAAA TGGAACAAGC AGAGTCTTTA TTTTATCTCA
AATACGGCGG TGGGCGCGAA AAGCAAAGTC AAAACGCGGC TGTACTACGA CACCTTCGTG
AATTCGCTGT TCAGCTTCGA CGATACGACC TACACCGCGC AAACGAAGGG ATACGCGTTT
CAGAGCTTTT ATGATGATTA CACATTGGGC GGAAATGCAG AATTCGAGTC GCGGGCGTGG
GAAAACAATG TGTTCAAATT CAATGTTCAG TACAAGCGCG ACATCCACCG GGAAAACGAC
AAAGGCGAAC CCGTCCAATC CTACATCGAC AACACGATCT CCATCGGCAT CGAAAACACC
TACCAGATCA TCCCGTCGCT CGCTGTGGTG CCGGGCGTCA GTTTCAATGC CCGGAATGCA
AGCCAGGCGC AGGAATACAA TGCCACCACC AAGGAGCTGA GCGACTTTTC CGATAGTAAA
AACAATGCCG TCAATGCACA AATCGGCCTT TTCTGGGACA TTACCGCCAG CCACTCGCTG
CGCGGGAGCG TTGCCCGTAA GACCCGGTTT GCTACGATCA AGGACCGCTA CTCCTACCGC
ATGGGCCAGG CCATCCCCAA TCCCGACCTG CACGCCGAAG TAGCCCTGAA CTTCGACCTG
AGCTATTCGG GCAAAATAGC GGATAAACTT GCATTACAGG CCAGCATTTT CCAAAGCAAT
ATCGACGACA TTATCCAGCA GGTGGACAAT GTACAACCGA ACCGCTTTCA GCTACAAAAC
GCCGGAAAAG CGCGTTTCTA CGGCGCGGAA GCTGGTTTTG AATATCAGAT CACCACCGGC
CTGAAACTCG GCTCGAACTA TTCTTTTATC AAACGGAAAA ACAAAACCAA CCCGTCGATC
CCATTCACGA ACGTGCCGGA GCACAAGGTT TTCGCCTACG CCGACTTTTC GTTCCTGAAA
GTAGCTAATC TGCTCGCGAG CCTGGAAAAC AATAGCAGTC GTTACAGCAC GAGTTATGGC
ACAAAAGCAG GAGCATACAC GCTCCTGGAT GCCAAGGTGT CGGTAAAATT GTACAAATTC
ATTTCTACCG AAGCCGGTAT CAACAATATT CTGGATAAGA ATTATACTTT GATCGAAGGT
TTTCCCGAAG CGGGAAGGAA TTTCTTTATC AACCTGGTTT TCAATTATTT TTAA
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| Protein sequence | MRKLLLPLLS LLVFPTLAQE PSSLTDRTFQ LGEVRVSGIS HRDSLSSRLT YRTIEQFSRN
DLSNALNILP GVTMANVGPR NESVVYVRGF DLRQVPVYID GVPVYVPYDG YVDKGRFTTF
DLAEVNVSKG FASILYGANT MGGAINLVSR KPVNKFEING RAGVFSGGGY RWNVNAGSRL
GKFFYQVGAS QLKQDTYPLS ADFKPRKFQQ TDDRENAYRD DLKFSVKAGF TPNATDEYVI
GYINQHGEKG TPPYVGDDSK ITTRFWKWPK WNKQSLYFIS NTAVGAKSKV KTRLYYDTFV
NSLFSFDDTT YTAQTKGYAF QSFYDDYTLG GNAEFESRAW ENNVFKFNVQ YKRDIHREND
KGEPVQSYID NTISIGIENT YQIIPSLAVV PGVSFNARNA SQAQEYNATT KELSDFSDSK
NNAVNAQIGL FWDITASHSL RGSVARKTRF ATIKDRYSYR MGQAIPNPDL HAEVALNFDL
SYSGKIADKL ALQASIFQSN IDDIIQQVDN VQPNRFQLQN AGKARFYGAE AGFEYQITTG
LKLGSNYSFI KRKNKTNPSI PFTNVPEHKV FAYADFSFLK VANLLASLEN NSSRYSTSYG
TKAGAYTLLD AKVSVKLYKF ISTEAGINNI LDKNYTLIEG FPEAGRNFFI NLVFNYF
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