| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5173 |
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| Symbol | |
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| ID | 8228783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6237895 |
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| End bp | 6239130 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644933023 |
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| Product | integrase family protein |
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| Protein accession | YP_003089537 |
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| Protein GI | 255038916 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.54702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCT CAACCAAGTT TATCCTAGCT TCCAAAGTTA ACGATTCGTG CGAGTATCCG
ATAATGCTCC GCATCATTAT TAACCGTAAG AACCAGTTAG TCAGCACAAA GAAGAGCTGT
AAACAAGAAA ATTGGCTCGA AAATCAACAG CAAGTTGCCC GCGGTCACCC TAAGCATCAG
GAGATCAATT TACTCCTTAG AACAATCGTT TCTGAGTTAG ATTTTCTCAT CATATCCGAA
GGAAAAAAAG GTCGAAAGCC AACGTTCGAC GAAATGAAAA GTGTGGTTCG TAATTTGACC
GGAGCAACGA AAGAACCGGA GAGCAAATCA CTTTTTAAGC TCTTTGAGGA CCATATTTCT
CTGCTCAATC AGCAAAACCG GATTGGCTAC GCGGACACCT TTAAATTTAC ACTGAGCAGC
TTGAAAGGGT TTGTGAAAAA CAAAGACCGA GATCTCCTAT CTATCAATCT AAATTTTCTG
AAGAAATATG AAGAATACTT GATGGAACGC GGATGCGCTA TTACCACAAG AAGTGTCTAT
CTAAGGACCT TTAGAACGAT GTGGAAGGTG GCAATCCGAG AAAAATTTTG CTCCGAGGGC
CACTATCCTT TTAAAGAGCT CGCATTTGGC AAATACAACA ACCCTAGGAC AAAAAAAAGA
GCGATTCAAA AATCGCAGAT TGATCAAATC TCAGCCCTAG TGATCGATCC AATGAATGAT
ACACTCATTA ATTCACGTAA TTACTTCCTT TTCAGTTTTT ATTGCCGAGG AATCAATTTT
ACGGATCTTG CAAGTTTAAA ATGGGATAAC ATTGTTGATG ACGAACTTGA ATATATCAGA
TCGAAAACCA AGGAAGAATT TCGTTTTAAG CTCCATCCAG AAGCTATGCG GATCCTTGAT
TTTTACCGAA ACCTTCGAGG CAACAGCGAT GCCGGCTACA TCTTTCCCAT ATTGTACAAA
AGACACGACA GCATACAGTC GATCAGATAT AGAAAGCAGA AGATTCGAAC GCGGGTTAAC
AAGGACTTAC AAGAATTGGG TGCAATCTTA GGCATTCAGA AGAACCTGAC TACGTACGTG
GCCCGACATT CATATGCAAC CACGCTCCGG AGAAACGGAG TATCCAAGGA GAATATAGGC
AGATCATTGG GACATGACAG CTTAAAAACA ACTGATATTT ATCTGGAAGA CATCGGGGAT
CCAATTTTGG ATGAACTGAT TAACTCAACG CTTTGA
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| Protein sequence | MALSTKFILA SKVNDSCEYP IMLRIIINRK NQLVSTKKSC KQENWLENQQ QVARGHPKHQ
EINLLLRTIV SELDFLIISE GKKGRKPTFD EMKSVVRNLT GATKEPESKS LFKLFEDHIS
LLNQQNRIGY ADTFKFTLSS LKGFVKNKDR DLLSINLNFL KKYEEYLMER GCAITTRSVY
LRTFRTMWKV AIREKFCSEG HYPFKELAFG KYNNPRTKKR AIQKSQIDQI SALVIDPMND
TLINSRNYFL FSFYCRGINF TDLASLKWDN IVDDELEYIR SKTKEEFRFK LHPEAMRILD
FYRNLRGNSD AGYIFPILYK RHDSIQSIRY RKQKIRTRVN KDLQELGAIL GIQKNLTTYV
ARHSYATTLR RNGVSKENIG RSLGHDSLKT TDIYLEDIGD PILDELINST L
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