| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4830 |
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| Symbol | |
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| ID | 8228436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5836519 |
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| End bp | 5838834 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644932679 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003089196 |
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| Protein GI | 255038575 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT TTATCTTGAC CTTAGTGGCC GGGGCCGTGA GCGCCCTGGC CTTTGCGCAG
CCTGCACAGA CCGTCAAAGG ACGGGTCGTC GATACCGAGT CGCAGCAGCC GGTGATCGGC
GCGAATGTGA TCGTTACTTC TACTACGCCC ATTATCGGTG GTGTAACGGA TACGGAAGGC
AATTTCCGCA TTGAAAAAGT GCCCGTCGGC CGACATTCGT TTAAGATTAC GAGCCTGGGT
TACGACGATG CCTTTATCCA GGAAATCAAC GTCGGCTCCG GCAAGGAAGT GGAGCTGAAT
ATCAAACTCA CCGAGTCGTT CAAAGCGCTT AATGAGGTGG TTGTGAAAGC GCAGAAGGAA
AATGGCGCGC CGCTGAACGA CATGGTGAGC GTGAGCGGCC GCTCTTTCAC GGTGGACCAA
ACGAAGCGCT TCGCGGCGTC GGTGAACGAC CCGGCGCGGA TGGCGATGTC ATTCGCCGGC
GTGGCCGCAA CCGACGACGG CAGTAACCAG CTCATCATCA GGGGAAACAG CCCGAAAGGC
ATGCTGTGGC GCATGGAAGG CGTCGAGATC CCCAATCCCA ATCACTTTGC GCAGGAAGGA
GCAAGCGGCG GCGGCATCAG CGCGCTGAGT GCCAATGTGC TCGGTAACTC CGACTTCCTT
ACCGGCGCTT TTCCAGCGGA ATACGGCAAT GCGACTTCCG GTGTTTTTGA CCTCAAACTC
AGAAAAGGGA ACAATGAAAA ACGCGAATAT GCAATGCAGG CCGGCATTCT CGGGCTCGAT
TTTGCTGCCG AAGGACCCAT TGGTCCCAAG GGCGGCGCTT CTTATCTGGC CAATTACCGC
TATTCTACTC TTTCCGTTCT TAATAAGGTC GGCGTTAACC TTAATGGCGA TGCTTCGATT
GATTTTCAGG ACGGTGCTTT TAAAATATAT ATCCCTTACG ACGACAAGGT GGTTGTGAGC
GTGTGGGGAA TGGGCGGCCT GAGTACATCG AAAGTCGATG ACGACGACTG GAGAGAGACT
TTCAAATCCA ACCGCGGCAT TGTGGGCGTC AATTACCTTC GCTATATCAA CAACAAATCG
TATATGGAGA ATGTCGTTTC CTACTCGGCG ACGAGCCAGA CGGGCGATTT CTACGATAAA
AACATCGACG CGACTTATCA GCAAAAGTTT GTGAATCAGG CATTAAGGCT CTCCTCTCTC
TATAATTATA AACTCAATGC ACGCAACACG GTGCGGCTGG GCGTGATCAT TAACCACCTG
GACTTCAACC TCTACGACAA GGATAATGAG GACGGCCCCT ACGAAGTGAA TGTGGACCGG
AAAGGCAATA CCCAGCTGTT TCAGGGCTAT GCACAATGGA AGTCGCGTTT AACGCCTACC
GTTACGCTCA ATGCCGGCTT GCACGGAATG CTGCTCGCAC TGAACCATCG TTTCTCCATT
GAACCGAGAG CTGGACTGAA ATGGGCAGTG GCACCGCGGT CGACCGTGAG CTTCGGCGCG
GGGCTGCATA GCAAAACGGA AGCCATTTCG ATGTACCTGG CCCAGGTGAA GGTGTCGGAG
GATAAAACAG AATTGTTTAA TAAAAACCTG AAACTCACCA AATCGGCGCA TTTGGTGGCG
GGGTATGAGT TCAGGCCGTC GGCGAGCTGG CGCATTCTCG CTGAAACTTA CTACCAGCAT
CATTACAACA TCCCGATCGG CCCGGCGAAT ACCACAACGC CCTATCTGCT GCATAACTCG
CAGCTGAACG AAATCAGCGG TTTTGTGAGC GATTCGCTGA CGAGCGATGG CAAGGGCCGC
AGCTACGGGC TGGAAATAAC CGTGGAAAAA TCGCTGACCG CGGGCATTTA TGTCATGAGC
ACCACGTCCC TATATCAGTC AAAATACACC GGGCGTGATG GCATCGAGCG TGACAGCCGC
TTCAATGGCC AGTATGTGCA GAACTTACTC GCTGGGAAAG AATGGCGTGT CGGAAAAAAC
AAAACCAACA TTTTCGCAGC CAATATCAAG CTTTTGGCTG CCGGCGGCAA CCGGACAACG
CCCATCGACC TGGAAAAATC ACGCGAAAAG GGACGTACCG AAAGAGATTG GTCACGCAGC
TATTCGGACA AGCTTCCCGA CTATTTCCGC GCCGATCTGC GTGTGAGTTA TACCAAAAAC
AAACGACGCA CGACGTCCAC GATCTCCCTC GACCTCCAAA ATGCAACCAA CCGCCTGAAT
GCATTGGAGC GCTACTATAA CAAGAAAGAG GACCGCGTAA AAACCGTGAC TCAAACCGGG
CTGCTGCCGG TGCTGAACTA CCGCCTTGAA TTTTAA
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| Protein sequence | MKKFILTLVA GAVSALAFAQ PAQTVKGRVV DTESQQPVIG ANVIVTSTTP IIGGVTDTEG
NFRIEKVPVG RHSFKITSLG YDDAFIQEIN VGSGKEVELN IKLTESFKAL NEVVVKAQKE
NGAPLNDMVS VSGRSFTVDQ TKRFAASVND PARMAMSFAG VAATDDGSNQ LIIRGNSPKG
MLWRMEGVEI PNPNHFAQEG ASGGGISALS ANVLGNSDFL TGAFPAEYGN ATSGVFDLKL
RKGNNEKREY AMQAGILGLD FAAEGPIGPK GGASYLANYR YSTLSVLNKV GVNLNGDASI
DFQDGAFKIY IPYDDKVVVS VWGMGGLSTS KVDDDDWRET FKSNRGIVGV NYLRYINNKS
YMENVVSYSA TSQTGDFYDK NIDATYQQKF VNQALRLSSL YNYKLNARNT VRLGVIINHL
DFNLYDKDNE DGPYEVNVDR KGNTQLFQGY AQWKSRLTPT VTLNAGLHGM LLALNHRFSI
EPRAGLKWAV APRSTVSFGA GLHSKTEAIS MYLAQVKVSE DKTELFNKNL KLTKSAHLVA
GYEFRPSASW RILAETYYQH HYNIPIGPAN TTTPYLLHNS QLNEISGFVS DSLTSDGKGR
SYGLEITVEK SLTAGIYVMS TTSLYQSKYT GRDGIERDSR FNGQYVQNLL AGKEWRVGKN
KTNIFAANIK LLAAGGNRTT PIDLEKSREK GRTERDWSRS YSDKLPDYFR ADLRVSYTKN
KRRTTSTISL DLQNATNRLN ALERYYNKKE DRVKTVTQTG LLPVLNYRLE F
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