Gene Dfer_4800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4800 
Symbol 
ID8228406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5803151 
End bp5804143 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content50% 
IMG OID644932649 
Productglycosyl transferase family 2 
Protein accessionYP_003089166 
Protein GI255038545 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0196264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAG TGAGCGTGTG TGTAGTCACC TACAACCACG AAAAATTTGT AGCGAAAATG 
CTGGACTCGA TCCTGATGCA GCAAACTACA TTTGATTTCG AGATCGTGGT GGGGGATGAT
TACTCCAAAG ACAACACCCG TGCGATATTG ACCGAGTACC AGCAACGCTT CCCCGATAAG
ATCCGGCTCT TGTTACACCC GAAAAACATG GGCCTCAACG GAAAGTTCAA CGCATTATCC
ACCTTTGCCG CGGCGAAGGG GGAATACATT GCGCAGTTCG ACGGCGACGA CTATCTGCTC
GTTCCGGATA AGCTGCAAAA GCAGGTTGAA ATGATGGATG CTAACCGGCA TTACTCCGCC
TGTTTCCACA ATGCAAGGGT GATTTACGAT GACAATGCTG CGCCCCCGCA CCTCGTCAAT
TGGATTAATA AAAAAGAATT TACGGTGGAC GACCTCATCG GTGAGGACGA GCTTTGCTTC
ATCGCCACGT CGAGCCTGAT GTTCCGCCGG GAGGATTTTG CGAAAAATCC TGATCCCGAA
TGGACCAACC GCTCCACCAG CGGCGACATT CCCCGCAACA TCATGCTCGC AACCCGCGGA
CCGATCGGTT ATATTGATGA AGTAATGTCG GTGTACCGCA AGCAGCGCGG AGGGGCCAGT
TTTGCGGATA ATCACTATGG GAAGGACTTT CTTTTCAACC GCATTGAGAT GTATTCCAAT
ATTGATAAGG AGTTGAAATA CCAATACCAC GACCGGCTCA CGAAGAATAT CGCGACGTAC
TACTACAAAA TGCTGTTTTC GAGGGAATAC GGCCACACTT ACTGGCCGAG GGTCAAATAT
GCCGTGAAAT ACCTTTCAAT GGCCGATCCC GCGCCCGAGC GACGGAAAGA GGTGATCAGG
GACTTCATCA TCCCGCCGGT TTTTATGAAG ATTTACAGCT TTTTCGCGCT GAACCTCTAC
AACCTGAAAA GTAAGGTTTC GGGGCAGAGC TGA
 
Protein sequence
MIKVSVCVVT YNHEKFVAKM LDSILMQQTT FDFEIVVGDD YSKDNTRAIL TEYQQRFPDK 
IRLLLHPKNM GLNGKFNALS TFAAAKGEYI AQFDGDDYLL VPDKLQKQVE MMDANRHYSA
CFHNARVIYD DNAAPPHLVN WINKKEFTVD DLIGEDELCF IATSSLMFRR EDFAKNPDPE
WTNRSTSGDI PRNIMLATRG PIGYIDEVMS VYRKQRGGAS FADNHYGKDF LFNRIEMYSN
IDKELKYQYH DRLTKNIATY YYKMLFSREY GHTYWPRVKY AVKYLSMADP APERRKEVIR
DFIIPPVFMK IYSFFALNLY NLKSKVSGQS