Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4624 |
Symbol | |
ID | 8228230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 5587094 |
End bp | 5587783 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644932473 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003088990 |
Protein GI | 255038369 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAC AAGTCATCGT CAGCGGAGCC ACGGGAAATC TCGGGAAAGA TGTTGTCAAA AAACTCACGG AGTTTGGTTA TGGCTTGCAT ATCAATGTGC GCAAAGGGAA AACGGATGCT TACGCGGATA ATGCGAATGT CTCCAGTTAC CTGGCCGACC TCGCCCATCC CGAACAGGCT GACGTATTTG TCGCAGAAGC CATTGCCAAT GCAGGCAAAA TAGAGGCCGG GATATTGCTC GCAGGCGGTT TTGCGATGGC CAAACTGACT GATACCACCG ACTCGGACAT CGAGCAAATG CTGTCGATCA ATTTCAAAAC GGCTTTCCAT GTCGTAAAGC CGCTCATGAA GCATTTTGAG GCAAACGGGG GCGGGCAATT CGTGTTCATC GGCGCACGGC CGGCGCTGGT AGCCGAGGCG GGTACGGGCA GCTTTGCCTA CACCCTTTCC AAAACATTGA TCTTCCAAAT GGCCGATCTC ATCAATGCAG AAGGCAAATC GAAGCATATC ACGGCCACGG TGATTGTCCC GAGCATTATC GACACGCCTG ATAACCGCGC CGCCATGCCA GGCTCCGATT TCAGCAAATG GATTCCCGCC GCGGACATGG CCGAAGGCAT TGCATTCGTG CTGAGTGATA CGGGCAAAAA GCTGCGGCAA ACCGTATTGA AGCTCTATAA CGAGGCCTGA
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Protein sequence | MPKQVIVSGA TGNLGKDVVK KLTEFGYGLH INVRKGKTDA YADNANVSSY LADLAHPEQA DVFVAEAIAN AGKIEAGILL AGGFAMAKLT DTTDSDIEQM LSINFKTAFH VVKPLMKHFE ANGGGQFVFI GARPALVAEA GTGSFAYTLS KTLIFQMADL INAEGKSKHI TATVIVPSII DTPDNRAAMP GSDFSKWIPA ADMAEGIAFV LSDTGKKLRQ TVLKLYNEA
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