Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_4584 |
Symbol | |
ID | 8228190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 5536035 |
End bp | 5536424 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644932433 |
Product | histidine triad (HIT) protein |
Protein accession | YP_003088950 |
Protein GI | 255038329 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000842385 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCTA TATTTTCAAG GATCGTAGCA GGCGAGATCC CCGCCCATAA AATTGCCGAA ACAGAGGATT TTCTCGCGTT TCTCGACGCA TTCCCCATAA CAGAAGGCCA TACGCTGGTT ATTCCCAAGA AGGAAATCGA CTATCTGTTC GACCTCGACG ACGCGCTTTA TACAGGCTTG TTCCAATTTG CCAAAAGCAT TGTTCCTGCG TTGGAAAAAA CCGTCCCGTG CCTGCGCATT GGCGTGAGTG TGATCGGTCT GGAAGTGCCT CACGCGCACG TACATCTGCT TCCGCTGAAC AGCATGGATG ATGCTGATTT TACCAAAAAA ATAAAAACGT CGCAGGAAGA ACTTGCGACG TTGGCGGAAA AGATCAGAAG TAACCTGTAA
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Protein sequence | MASIFSRIVA GEIPAHKIAE TEDFLAFLDA FPITEGHTLV IPKKEIDYLF DLDDALYTGL FQFAKSIVPA LEKTVPCLRI GVSVIGLEVP HAHVHLLPLN SMDDADFTKK IKTSQEELAT LAEKIRSNL
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