Gene Dfer_4584 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_4584 
Symbol 
ID8228190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp5536035 
End bp5536424 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content48% 
IMG OID644932433 
Producthistidine triad (HIT) protein 
Protein accessionYP_003088950 
Protein GI255038329 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0000842385 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTA TATTTTCAAG GATCGTAGCA GGCGAGATCC CCGCCCATAA AATTGCCGAA 
ACAGAGGATT TTCTCGCGTT TCTCGACGCA TTCCCCATAA CAGAAGGCCA TACGCTGGTT
ATTCCCAAGA AGGAAATCGA CTATCTGTTC GACCTCGACG ACGCGCTTTA TACAGGCTTG
TTCCAATTTG CCAAAAGCAT TGTTCCTGCG TTGGAAAAAA CCGTCCCGTG CCTGCGCATT
GGCGTGAGTG TGATCGGTCT GGAAGTGCCT CACGCGCACG TACATCTGCT TCCGCTGAAC
AGCATGGATG ATGCTGATTT TACCAAAAAA ATAAAAACGT CGCAGGAAGA ACTTGCGACG
TTGGCGGAAA AGATCAGAAG TAACCTGTAA
 
Protein sequence
MASIFSRIVA GEIPAHKIAE TEDFLAFLDA FPITEGHTLV IPKKEIDYLF DLDDALYTGL 
FQFAKSIVPA LEKTVPCLRI GVSVIGLEVP HAHVHLLPLN SMDDADFTKK IKTSQEELAT
LAEKIRSNL