| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4538 |
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| Symbol | |
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| ID | 8228141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5474794 |
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| End bp | 5475639 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644932384 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003088904 |
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| Protein GI | 255038283 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.535239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTG GTATCAACAC TTACCTGTTT TCTTCACCAT TTACGAACGA AAGCACCTCG
ATTTTTCCAC AGTTTAAATC GTGGGGTTTT GATTTCGTCG AAATCGCGCT CGAAGATCCC
GCGCATATCG ATCCGCACAC GGTAAGGAAG GCGCTGGACG ACAATGGGCT TGAATGCCGG
TCGGTGTGCG CTGCAACCGG CCCCGGACGC GACCTGCGCG GCACGCGGAA GGACCAGGTA
ACGGCGATCG AATATGTGGA AGCGCTTATC CGGATAGCAC CGGTGCTGGG CAGCAAGCTG
GTGGCCGGGC CGATTTACTC AGCAGTAGGC CGCGCCGAGC TGGTGCCCGA GGATCAGAAG
CGCAAGCAGT GGGAACTCGT TGCAGGCAAC CTGAAAGCCC TGGCCGATTT TGCGGCAAAG
CACGACGTGA AGATTGCCAT TGAGCCATTG AACCGCTATG AAACCGATTT TATCAACACC
TGCGACCAGG CTCTGCGGAT GATCGACAAC GTGGGCAGTG ATGCATTGCA GGTACACCTG
GACACATTTC ACATGAACCT CGAAGAAAAA GACCCCGCTC AGGCGATCCG GAAAGCAGGG
CACAGGCTGG GCCTTCTGCA CGCATCCGGC AGCGACCGCG GCACGCCGGG AAACGATCAG
ATCAATTGGG ACCGCATTTT CGCCGCACTC GATGCAATCC ATTACCCGGG CGATATTGTG
ATCGAGTCAT TTACGCCGGA TGTGAAAGTG ATTGCCAAGG CGGCGTCGAT CTGGCGGCAG
GTAGAGCCTT CACGGGAGGC GATTGCCGTG GATGGATTGC ATTTTTTGCG GTCACTGGCA
TTCTAG
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| Protein sequence | MKFGINTYLF SSPFTNESTS IFPQFKSWGF DFVEIALEDP AHIDPHTVRK ALDDNGLECR
SVCAATGPGR DLRGTRKDQV TAIEYVEALI RIAPVLGSKL VAGPIYSAVG RAELVPEDQK
RKQWELVAGN LKALADFAAK HDVKIAIEPL NRYETDFINT CDQALRMIDN VGSDALQVHL
DTFHMNLEEK DPAQAIRKAG HRLGLLHASG SDRGTPGNDQ INWDRIFAAL DAIHYPGDIV
IESFTPDVKV IAKAASIWRQ VEPSREAIAV DGLHFLRSLA F
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