| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4184 |
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| Symbol | |
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| ID | 8227782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 5053415 |
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| End bp | 5056543 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644932027 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003088552 |
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| Protein GI | 255037931 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.174164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA ATTCCATGAA GTGTTTTAAG TGGATGGGGC TCTGGCTCGC TGCGGCAGTT
TTGCTCGTGC CTCCCATCAG CTTTGCCCAC ACCCTAACAA ACCCCATTGC AGCCGTTGCC
GACAAAGCGG TAACGGGAAA AGTATTGGAC GCTCAGGACG GGCTGCCCAT CCCCGGCGTA
ACGGTGGTCC TGAAAGGCAC CACCACCGGA ACCACTACGG ACGCCGACGG CGCCTACCAG
ATTTCTGTCC CCGGCAACGA GTCGGTTCTC GTGTTTTCGG CGGTGGGTTT CCTCACGCAG
GAAAAAGTGG TGGGCAATGC GTCCATTCTC GACATCCGGC TTGCCAGCGA CCAGAAAACG
CTGGACGAGG TGGTAGTGGT AGGTTACGGA ACGCAGAAAA AACGTGACCT TACAGGTGCC
GTTTCGCAGA TCGCAACCGC AAAACTGGAA AACGAAAACC CCAACTCGGT CCAGGATATC
CTGCGCGGCA ATGTGGCGGG CCTGAACGTG GGCATGTCTC CCTCGGCGAA GGGCGGCGGT
AGTTTGCTCG TGCGTGGCCG TAACTCGATC AACGCGGCCA CAAGCCCGCT CCTCGTCCTT
GACGGCGCGA TTTACTATGG CGAATTGTCG GATATCAATC CCAATGACAT CGAAACGATC
GACGTTCTGA AAGATGCCAG CTCAGCGGCC GTTTTCGGGT CCAAAGCAGC AAGCGGCGTT
ATCCTCATCA CCACCAAAAA AGGAAAGGAA GGCAAAGCAC GAGTGAACAT CAACAGTAAT
GTGGGTATTG GTAATGTTTC CAAAAATCAG CCCGTGCTGG GCCCGGACGA ATTCGTTGCC
TGGCGTGGCG AGGTGATGAA GAACATCAAT GCTTCCTACA AGCCTCACCA GTTCGACAAC
CCGGCCAATC TGCCTTCGGA TATTACGCTC GATCAATGGC TTGCCTACGA CAAGTCTTCC
GGCGACCCTA CGACCGTCTG GTTACAGCGC CTGGGCATGC AGCCCATCGA AATCGAAAAT
TACAAAGCCG GCCGCAGCGT GGATTGGTAT TCAAAAGTAT TCCAAACGGG GCTGCGCCAG
GATCACACGG TGAGCCTTTC GGGCAAGAAG GAGGCTGTCA GCTATTTTAT GTCGCTGGGT
TATCTCAACA ACGAAGGCAT TATCACAGGC GATAAATTCT CCACGGTCCG CGGCCGCATT
AACCTCGAAG GCCAGGTGAC CAAATTCCTT TCGGTGGGGA TTAATACGCA GTTTGCCGAC
CGCGACGAGA GCTCGGTGCC GGTGGACTAC GGCCTTGCCC GCATTCTTTC CCCCTGGGGC
TCCGAGTTTA ATGAAGACGG TACGTACAAA TGGCGGCCCA ACAACGAGGC AAGCGGCGGG
AACCACCCCT ACTATGCACG CCAGTTCATC GACCGCAAGC ATCAGATCAC CACCTTCAAC
TCCACGCTCT ACGGGAACAT CACGCTGCCG TTCGGCTTCT CTTTCCGCGT GAACTTCACA
CCGCGCTACG AATACTACGA CCGCTATAAC CATGAATCCG CCTCGCATGC CGAATGGGCT
GCCGTGGGTG GTACGGGATC ACGCCAGAAC CGCAAAACTT TCCAATGGCA GGTAGATAAT
ATCCTGAAAT GGAACAAAAC ATTCGGCAAA CACAACTTTG ATGTCACATT GCTCGCCAAT
GCGGAGAAAT ACCAGCGGTG GGACAATACC ATGACCAATA AAGGCTTCCT GCCGACCGAC
GCGCTGAGCT ACCATGGGAT CGGAACGGGC ATTAACCCCA CCGTGTCCAG CTATGACCAA
TACAGCACCG GCGATGCATT GATGGCGCGC GTGTTTTACT CGTTCAAAGA CCGGTACATG
GTTACGCTAT CAACCCGCCG CGACGGTTAC TCGGCATTCG GCCAGGCCAA TCCGCGCGCA
ACGTTCGGTT CGGTGGCGTT GGGCTGGGTA TTTACGGACG AAAGCTTCTG GAAAAGCAGC
TGGCTCAACT ACGGTAAGCT GCGCGCTACG TGGGGAAGTA ATGGGAACCG GGACATTGGG
TTATACTCGG CCGTTTCGGA CCTGCAAACG GGCAAGTACC TGCACGTGCG CCCGGACGGG
ACTGTTTACC TTGTGAACCA GCTGTATGTA AACCAGTTGC AAAACGCGAA CCTGAAATGG
GAACGGACTG CGTCCTATAA CCTGGGTCTC GATTTTGGTT TATTCAATAA TAAAATCGAT
GGTTCTGTTG AAGTGTACAA ATCGTCGACC ACTGACCTGC TCGTTCAGCG GGCATTGCCG
GATATTCTTG GTTTCAGCTC TTATTGGGAT AACCTCGGGG AAGTACAAAA CCGGGGTATT
GAGCTGAGCC TAAACTCGGT TAATATGGAC CGCAACAAGT TCTCATGGCG CTCGACGCTC
ACTTTCCAGC TCAACCGCAA CAAAATCGCG CGGCTCTATG GCGACCTCGA CGAAAACGGC
AAAGAGAAAG ATGACGTCGC CAACAGGAGA TTTATCGGCC ATTCGCTTGA TGAAATCTGG
GATTACAAGA TCCTGGGCGT GTGGCAAGTC GAAGAAAAGG ATGAAGCCGC TAAATACGGC
GTAAAACCCG GCGATTTCAA ACTGGAAGAT GTGGATAAAG ACGGCAAGTT CACCAATGCC
GACAAGCAGT TCCAGGGCTG GACCAACCCG CGCTTCCGCT GGACATTGAG GAATGACTTC
AAACTGTTCA AAACACTGGA CGTCGGCATT GCCATTTACT CGTATTGGGG GCACAAGGCA
ACCTACAACC AGCGCAAAAA CCGCGACGGC TTCCTCGACC GGACCAGCTC TTACCAATTC
CCCTACTGGA CCGAAGAAAA CCGCTCGAAC GAATGGGCGC GCTTATATTC CAGCGAAGGC
GGAGCGAGCG GTTTCGGGGT TTACCAGGAA CGCTCTTTCA TTCGCTTGGA TAACGTTTCC
CTTGGCTACA CCCTGCCGCG GAGAATCGTC GAGAAGATCA AGGTGGACAA TCTGAAATTC
TTCTTTTCTG CCAAAAACCT GGGTTACTAC GCACCCAAAT GGGATTTCTG GGATGCCGAA
CCTAACGACG ACAACCAGAA CGTGCCAACG CCCCGCCTGC TGACGGTGGG TGTGGACATT
ACATTGTGA
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| Protein sequence | MKENSMKCFK WMGLWLAAAV LLVPPISFAH TLTNPIAAVA DKAVTGKVLD AQDGLPIPGV
TVVLKGTTTG TTTDADGAYQ ISVPGNESVL VFSAVGFLTQ EKVVGNASIL DIRLASDQKT
LDEVVVVGYG TQKKRDLTGA VSQIATAKLE NENPNSVQDI LRGNVAGLNV GMSPSAKGGG
SLLVRGRNSI NAATSPLLVL DGAIYYGELS DINPNDIETI DVLKDASSAA VFGSKAASGV
ILITTKKGKE GKARVNINSN VGIGNVSKNQ PVLGPDEFVA WRGEVMKNIN ASYKPHQFDN
PANLPSDITL DQWLAYDKSS GDPTTVWLQR LGMQPIEIEN YKAGRSVDWY SKVFQTGLRQ
DHTVSLSGKK EAVSYFMSLG YLNNEGIITG DKFSTVRGRI NLEGQVTKFL SVGINTQFAD
RDESSVPVDY GLARILSPWG SEFNEDGTYK WRPNNEASGG NHPYYARQFI DRKHQITTFN
STLYGNITLP FGFSFRVNFT PRYEYYDRYN HESASHAEWA AVGGTGSRQN RKTFQWQVDN
ILKWNKTFGK HNFDVTLLAN AEKYQRWDNT MTNKGFLPTD ALSYHGIGTG INPTVSSYDQ
YSTGDALMAR VFYSFKDRYM VTLSTRRDGY SAFGQANPRA TFGSVALGWV FTDESFWKSS
WLNYGKLRAT WGSNGNRDIG LYSAVSDLQT GKYLHVRPDG TVYLVNQLYV NQLQNANLKW
ERTASYNLGL DFGLFNNKID GSVEVYKSST TDLLVQRALP DILGFSSYWD NLGEVQNRGI
ELSLNSVNMD RNKFSWRSTL TFQLNRNKIA RLYGDLDENG KEKDDVANRR FIGHSLDEIW
DYKILGVWQV EEKDEAAKYG VKPGDFKLED VDKDGKFTNA DKQFQGWTNP RFRWTLRNDF
KLFKTLDVGI AIYSYWGHKA TYNQRKNRDG FLDRTSSYQF PYWTEENRSN EWARLYSSEG
GASGFGVYQE RSFIRLDNVS LGYTLPRRIV EKIKVDNLKF FFSAKNLGYY APKWDFWDAE
PNDDNQNVPT PRLLTVGVDI TL
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