| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3990 |
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| Symbol | |
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| ID | 8227586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 4838844 |
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| End bp | 4840139 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644931832 |
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| Product | General substrate transporter |
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| Protein accession | YP_003088359 |
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| Protein GI | 255037738 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0341407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.697867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAAA CTTTACACAA AGACGACACC GGCTGGCGCC TCAGAGCCAT TATCGGCGGA
TCGGCCGGCA ATCTCGTCGA ATGGTACGAC TGGTACGCCT ATTCCGCCTT CTCTCTCTAT
TTCGCCAATA CTTTCTTCCC AGATTCCAAT CCCACGGTCC AGCTGATCAA TACCGCCGGC
ATTTTCGCAG TGGGTTTCCT GATGCGGCCG ATCGGCGGCT ATGTTTTTGG CAAACTGGCC
GATAACCGCG GGCGAAAGGT GGCCATGACC GTGTCGGTGC TGCTGATGTC GCTTGGCTCG
CTGCTGATTG CATTCCTGCC CGGCTATAAC AGCATCGGCG TGGCGGCTCC GCTTCTGCTG
CTGCTCGCCC GCTTGCTGCA AGGCCTTAGT GTGGGCGGGG AATATGGTAC TTCGGCCACC
TACCTCAGCG AGGTGGCTAC GGAGGCGAAA CGTGGTTTCT TTTCCAGTTT TCAATATGTG
ACGCTCATTG GCGGACAGCT TATTGCATTG GGTTTGCAAC TCATTTTACA AAACATTTTC
CTCACCGACC AGCAAATGCA CGACTGGGGC TGGCGCATTC CGTTCGTTAT CGGAGCATTG
CTTTCGCTCG TAGCATTGTA CCTCCGCGCG CATCTGAACG AAACCGAAGC ATTTCAATCC
AAAGATCCCA AAACAAAAAA GGAAGGCTCG CTGAGAGAGC TTATGAAGCA TCCGAAGGCC
GTGTTGGTGG TCGTGGGGCT TACCGCGGGC GGGACACTCG CATTTTACAC CTACACCACA
TACATGCAGA AGTTCCTTGT GAACACGGTG GGGCTCACAA AGTACCAGTC GACTCTGCTT
ACTTTTTGCT CTTTGTTCAT CTTCGCGGCA TTGCAACCCG TTTTCGGGGC GCTCAGCGAC
CGCATTGGCC GCCGCCCGCT GCTGATAGCA TTCGGCGTGC TGGGAACGAT TTTTACCTAT
CCGCTGCTAG CTACGCTCAG CCACACTACA GGCATGTGGC CCGCATTCGG GCTGCTCATG
GCCGCGTTGA TCATCGTGAG CGGTTATACC TCCATTAATG CCGTGGTGAA AGCCGAACTT
TTTCCAGTGG AAGTGCGTGC GCTGGGTGTA GGGCTGCCCT ACTCCATTGC GGTGGCCGTG
TTTGGCGGCA CGGCGGAATA CTTTGCATTA TGGGCCAAGA ATATAGGGCA CGAAACCTGG
TACTACTGGT ATGTGACGGC CTGCATTTTC GCTTCGCTCA TTGTTTACAT CCGCATGAAG
GACACCAAGC ACACTTCGCT CATCGAAAAG CATTGA
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| Protein sequence | MEQTLHKDDT GWRLRAIIGG SAGNLVEWYD WYAYSAFSLY FANTFFPDSN PTVQLINTAG
IFAVGFLMRP IGGYVFGKLA DNRGRKVAMT VSVLLMSLGS LLIAFLPGYN SIGVAAPLLL
LLARLLQGLS VGGEYGTSAT YLSEVATEAK RGFFSSFQYV TLIGGQLIAL GLQLILQNIF
LTDQQMHDWG WRIPFVIGAL LSLVALYLRA HLNETEAFQS KDPKTKKEGS LRELMKHPKA
VLVVVGLTAG GTLAFYTYTT YMQKFLVNTV GLTKYQSTLL TFCSLFIFAA LQPVFGALSD
RIGRRPLLIA FGVLGTIFTY PLLATLSHTT GMWPAFGLLM AALIIVSGYT SINAVVKAEL
FPVEVRALGV GLPYSIAVAV FGGTAEYFAL WAKNIGHETW YYWYVTACIF ASLIVYIRMK
DTKHTSLIEK H
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