8 homologs were found in PanDaTox collection
for query gene Dfer_3880 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013037  Dfer_3880  hypothetical protein  100 
 
 
589 aa  1214    Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5852  hypothetical protein  47.47 
 
 
623 aa  506  9.999999999999999e-143  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_0507  hypothetical protein  39.9 
 
 
574 aa  394  1e-108  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal  0.726877 
 
 
-
 
NC_014230  CA2559_01185  hypothetical protein  38.35 
 
 
697 aa  263  6.999999999999999e-69  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_1092  hypothetical protein  35.02 
 
 
523 aa  242  2e-62  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3918  hypothetical protein  34.62 
 
 
538 aa  236  7e-61  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.010077 
 
 
-
 
NC_009441  Fjoh_1657  hypothetical protein  34.9 
 
 
702 aa  230  6e-59  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_0919  hypothetical protein  33.73 
 
 
538 aa  214  2.9999999999999995e-54  Cytophaga hutchinsonii ATCC 33406  Bacteria  hitchhiker  0.00766732  normal  0.54495 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>