Gene Dfer_3837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_3837 
Symbol 
ID8227431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp4675492 
End bp4676322 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content51% 
IMG OID644931677 
Productglycosyl transferase family 2 
Protein accessionYP_003088206 
Protein GI255037585 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.567699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTT CCGTTTGCGT CCCGACGTAC AACCACGAGC AATACATAGG CCAAATGCTG 
GATGGCGCAT TCATGCAGCA GACCAACTTT GAGTTTGAAA TTGTGATCGG GGATGATGCT
TCTGCGGACG CGACGCCGGA CATTATCCGT GAATATGATG CAAAAAGGCC TGGCGTAATC
CGGGCTTTTT TGCATTCTGA AAACCAGGGG CCGAAAGAGC CGCGGGAGTT TGCAGGGCGC
AACAATGTGC TGCAATTGCT GAAAGCCTGC AAAGGAGAAT ATGTAGCGAT GTGCGAAGGC
GACGATTACT GGACCGATCC ATTGAAACTT CAAAAGCAGG TCGATTTCCT GGATGCGAAT
CCCGATTTCG CGGTTTGCCA TCATAATATG GAAGTTATTT ACGAAGATGG CTCTCCCTCA
CATTTCTTCA ATGCAGCCGA CCAGAAGGCG GTTTCTACCA TTGAAGATCT GCTCGAAGAC
CGATGGTTTA TGGCTACGGC CAGCTGGGTT TACCGCAATC ATTTCCTCAC CGAAGACTTT
GCCGAATGGC ACGCCAAAGC GGCTGCGGGT GACTGGGCGA TCATGTTCCA GCTGGCTGCG
AAGGGCAAAA TCGGGTATTT AAATGAGGTA ATGGGCGTTT ACCGCAAACA TAGCGCGGGG
CTGAGCCATG TACACGCACA CACGAATTTG AAATTTTTAC AAAACAGAAA GGAGATGTTC
ACGAATGTGG GCGAATGGCT GGGCGGGCGC TATGACGCGA CGGTCGGCAA GACCCTGCAA
CGCTACGACG AGCTTCTTGC CAGCCTTGAA AAAATTGGCA GTTCGAATTA A
 
Protein sequence
MKLSVCVPTY NHEQYIGQML DGAFMQQTNF EFEIVIGDDA SADATPDIIR EYDAKRPGVI 
RAFLHSENQG PKEPREFAGR NNVLQLLKAC KGEYVAMCEG DDYWTDPLKL QKQVDFLDAN
PDFAVCHHNM EVIYEDGSPS HFFNAADQKA VSTIEDLLED RWFMATASWV YRNHFLTEDF
AEWHAKAAAG DWAIMFQLAA KGKIGYLNEV MGVYRKHSAG LSHVHAHTNL KFLQNRKEMF
TNVGEWLGGR YDATVGKTLQ RYDELLASLE KIGSSN