| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3724 |
|---|
| Symbol | |
|---|
| ID | 8227309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 4533640 |
|---|
| End bp | 4534854 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644931556 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_003088094 |
|---|
| Protein GI | 255037473 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.856402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.603693 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAG TAGCAGAGCA AACCCGGTTG GCCGACCGCA TCAACGCCCT CGAAGAATCT
TCGACGCTGG CGATGACCAA AATGGCCCGT GAACTGGCCG CCCAAGGCCA TAAAGTGATC
AGTCTGAGCG TTGGAGAGCC AGACTTCAAG ACGCCCGCAC ACATTTGCGA GGCCGCTAAA
AAAGCCATCG ATGATGGTTT TCACGGTTAT TCACCCGTAG CAGGTTACCC TGATCTGCGA
AAGGCCATTG CCGATAAGTT AAAGCGCGAC AATAATATAG ATTGGAAACC CGAAAATATC
GTGGTTTCAA CCGGTGCCAA GCATTCACTC GCGAACGTGA TCCAGGTTCT GGTAAATCCC
GGCGACGAAG TGGTGATTTT CGCGCCTTAC TGGGTGAGCT ACTCCGAAAT GGTGAAACTG
GCCGAAGGAA AATCGGTGAT CATCGACGGT GCTTTTGAAA ATGATTTCAA AGTAACTGCG
GCACAGCTCG AAGCTGCCAT TACCCCACGT ACTAAAGTGG TAATGTACGC TTCGCCCAAC
AACCCGACTG GCGCTGTTTA TTCAGAAAAA GAATTGAGAG AGATCGCTGC GGTGCTCGAA
AAACACGAAG GCGTGTACGT GCTGGCAGAC GAAATCTACG AATATATCAA CTTTACCGAG
GAAGGCCATT TCAGCATCGG TTCTATTCCT GCATTGAAAG ACCGCGTGAT CACTGTGAAC
GGTGTGGCGA AAGGTTATGC GATGACAGGC TGGCGGATCG GGTTCATCGC TGCCGCGAAA
TGGATCGCGG ATGGTGTTGA GAAATTGCAA GGCCAGGTTA CTTCGGGAAC CAACTCTATC
GCGCAAAAAG CGGCTACGGC TGCATTCAAC GGTCCGAAGG AGCCTTCTAT CGAAATGGCG
AAGGCATACC ACCGCCGTCG TGACCTCGTG GTAGGTTTGC TGAAAGACAT CGAGGGCTTC
AAAGTGAATG TACCCCAAGG CGCATTTTAC GCATTCCCGG ATGTAAGCTA CTACTTCGGA
AAGTCTGATG GCGAGACTGT TATCAAAGAT TCCGACGATT TTTCCAACTG GCTTTTGAAC
AAATCCTACG TTTCGACCGT AGCAGGTTCA GGTTTCGGTG CGCCAAACTG CATCCGTATC
TCAACCGCCG CTGCCGACGA AGCTTTGGAA GAAGCGGTAA AGCGTATCAA AGAAGCGGTT
GCGACTTTGA AATAA
|
|---|
| Protein sequence | MSAVAEQTRL ADRINALEES STLAMTKMAR ELAAQGHKVI SLSVGEPDFK TPAHICEAAK
KAIDDGFHGY SPVAGYPDLR KAIADKLKRD NNIDWKPENI VVSTGAKHSL ANVIQVLVNP
GDEVVIFAPY WVSYSEMVKL AEGKSVIIDG AFENDFKVTA AQLEAAITPR TKVVMYASPN
NPTGAVYSEK ELREIAAVLE KHEGVYVLAD EIYEYINFTE EGHFSIGSIP ALKDRVITVN
GVAKGYAMTG WRIGFIAAAK WIADGVEKLQ GQVTSGTNSI AQKAATAAFN GPKEPSIEMA
KAYHRRRDLV VGLLKDIEGF KVNVPQGAFY AFPDVSYYFG KSDGETVIKD SDDFSNWLLN
KSYVSTVAGS GFGAPNCIRI STAAADEALE EAVKRIKEAV ATLK
|
|---|
| |