Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_3671 |
Symbol | |
ID | 8227256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 4470235 |
End bp | 4471305 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644931503 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_003088041 |
Protein GI | 255037420 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.252372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGC ATATCCTTAT CGTTCCGGGC GACGGAATCG GACAAGAAGT TACTGAGGTA GGAAAGGCAG TGTTGGTAAA AATTGCCGAG AAATTCGGTC ATGAATTCAC TTACGACGAG GCGTTGATGG GCCACGTCGC TATCGAAGCG ACCGGTAACC CGCTTCCGGA CGAAACGCTG GAAAAAATGC GCAACTCCGA CGCGATCCTT TTCGGTGCCG TTGGTCACCC GAAATACGAC AACGACCCGA CTGCCAAAGT TCGCCCTGAA CAAGGCTTGC TGAAAATGCG CAAAGAGCTG GGTTTGTATG CTAACCTCCG TCCGATCAAA TTGTTCGACG AATTGCTGGG TGCATCTTCC ATCCGTCCTG AAATCCTGAA AGGCTCGGAT ATCCTTTTCT TCCGTGAGCT GACAGGCGAC ATTTATTTCG GAGAAAAAGG TCGTAAAAAC GACAATAATA CTGCTTACGA CATCGCGGAA TACAGCCGTT ACGAAGTGAA ACGCATTGCC CGCAAGGCAT TCGAAGCTGC CCGGACACGT GGCAAGCGTC TCTGCTCTGT AGATAAAGCT AATGTTTTGG AAACCAGCCG TCTGTGGCGT GAAGTGGTTC AGGCTTTGGC TCCTGAATAT CCGGACATTA CCGTTGAGCA CCAGTTTGTG GATGCGGCTG CGATGATGCT CATCAAAGAT CCTAAGCGTT TCGACGTGGT GGTGACAGCG AACCTGTTCG GAGATATCCT TACCGACGAG GCGAGCCAAA TCGCCGGATC AATGGGAATG CTCGCCTCGG CTTCGGTTGG TGACAGCACC GGCGTTTACG AACCAATCCA CGGCTCAGCG CACGACATTA CCGGCAAAGG CGTTGCAAAC CCCTTAGCGT CAGTGCTTTC GGCCGCATTG CTCCTCGATA TTTCATTTGG TCTGAAGGAA GAATCGGAAG CGATTATTTC GGCGGTGGAC AAGTTGCTGA AAGATGGTTT CAGAACACGC GACATTGCCG ATGCTACCAC ACCGGCAGAC AAGATTCTGA ACACGCAACA AGCTGGCGAA GAGCTTTTGA AAAGAATCTA A
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Protein sequence | MKKHILIVPG DGIGQEVTEV GKAVLVKIAE KFGHEFTYDE ALMGHVAIEA TGNPLPDETL EKMRNSDAIL FGAVGHPKYD NDPTAKVRPE QGLLKMRKEL GLYANLRPIK LFDELLGASS IRPEILKGSD ILFFRELTGD IYFGEKGRKN DNNTAYDIAE YSRYEVKRIA RKAFEAARTR GKRLCSVDKA NVLETSRLWR EVVQALAPEY PDITVEHQFV DAAAMMLIKD PKRFDVVVTA NLFGDILTDE ASQIAGSMGM LASASVGDST GVYEPIHGSA HDITGKGVAN PLASVLSAAL LLDISFGLKE ESEAIISAVD KLLKDGFRTR DIADATTPAD KILNTQQAGE ELLKRI
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