| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3506 |
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| Symbol | |
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| ID | 8227091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4282573 |
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| End bp | 4283793 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644931342 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_003087880 |
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| Protein GI | 255037259 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAC TGCACACCGC CGACTGGCAT ATCGGCAAAA AGCTCGATAA CTTTTCCCGC
CTCGAAGAAC AACGGCTTGT CCTGGACGAA ATCTGCGAAA TAGCAGAACA CGAGGCCGTC
GACGCGATCG TGATCGCGGG CGACTTGTTC GACAACTTTA ACCCGTCGTC CGAAGCGACC
GAGCTTTTGT ACAGCACATT GCACCGGTTA TCTGCCAACG GCACCCGGGC CGTGATCGCC
ATCGCCGGCA ACCACGATTC CCCCGAACGC ATCCAGGTCC CCGACGCACT GGCGAAGGTT
TGCGGCATTC TGTTCGTCGG TTTTCCCAAT ACGGAAATCA GGCCATTCTG CACGCAGGGG
CAGGTCGATA TTATCAAAAC CGCGCCCGGC TTCCTGGAAA TCAAACTACC CAATGCCGCA
TTTCCCCTGC GCGTATTGCA CACGCCTTAC GCGAACGAGC AGCGCCTCAA AACGTTCCTC
GGCGTGGAAG AATCCGAAGA AGCATTGCGC ATTCACTTGC AGCAGCATTG GCAGCAGCTC
GCCGACGAGC ATTTGGACAA TAATGGCTTC AACCTGCTAG CCACGCATTT GTTCGTCATG
CAAAAAGGCG GCGAAATGCC CGAAGAGCCC GACGACGAGC GTCCGATCCT GCATATCGGC
GGCGCCCAGG CCATTTACAC CGAGAACTTC CCGAAGCAAG TGCATTACAT CGCATTAGGC
CATTTGCACC GCTTCCACCA GGTAGATAAG GTGCCCGCCC CGGCCGTATA TTCCAGCAGT
CCGCTGGCTT ACAGCTTTTC GGAAGCGAAT CAGAACAAGT ATGTAATATT AATCGAAGCC
GAAGCCGGAA AACTGGTCGG TTACACGCCT ATCGAGCTTT TGAAAGGCAA AAAGCTGCGC
CGCAAAAGCT TTCACAGCAT TGATGAAGCC ATTGAATGGC TAGGCGAGCA TTCGGAAGAT
TTGATAGAAC TGACCATTAT CTCGGATAAT TATCTCGAAG CATCCGATAA AAAGCGGCTG
ATGGAAGCGC ATTCCGGCAT TATCCAGATT ATTCCGCAGA TTAAGAAAAG TGAAGTAGCC
GATACGTCGT CGGAAGTGGA TTTGTCTTTG AGTATGGAGA AGTTGTTTCA GGAGTATTTT
AAATCTAAAA ACAAAGGCCA AGAACCTTCG AACGGCCTAA TGGAAGTCTT CCGAGAAGTG
CTAGGCAGCG AAGCAGAATG A
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| Protein sequence | MKILHTADWH IGKKLDNFSR LEEQRLVLDE ICEIAEHEAV DAIVIAGDLF DNFNPSSEAT
ELLYSTLHRL SANGTRAVIA IAGNHDSPER IQVPDALAKV CGILFVGFPN TEIRPFCTQG
QVDIIKTAPG FLEIKLPNAA FPLRVLHTPY ANEQRLKTFL GVEESEEALR IHLQQHWQQL
ADEHLDNNGF NLLATHLFVM QKGGEMPEEP DDERPILHIG GAQAIYTENF PKQVHYIALG
HLHRFHQVDK VPAPAVYSSS PLAYSFSEAN QNKYVILIEA EAGKLVGYTP IELLKGKKLR
RKSFHSIDEA IEWLGEHSED LIELTIISDN YLEASDKKRL MEAHSGIIQI IPQIKKSEVA
DTSSEVDLSL SMEKLFQEYF KSKNKGQEPS NGLMEVFREV LGSEAE
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