| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3424 |
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| Symbol | |
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| ID | 8227003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4183722 |
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| End bp | 4186169 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644931255 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003087799 |
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| Protein GI | 255037178 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.053865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAAAA TTACTACCTA TCTGCTGGCG CTGCTGCTGA GCGCCACTTC ACTCCTCTCT
TTTGCCCAAA AAAGCGTTTC AGGCCGTGTT ACCGATGCCG AAGACGGCAA ACCACTGCCC
GGCGCGACCA TTAAGGCCGG CGAGATCCGC GGCACCAGCA CCGACAAGGA CGGCCGTTTT
ACATTAAAAA ACATCTCCGA AAATATCGAC GCTCTCGACA TTTCCTATAT CGGCTACCAA
ACTTCCAAAG TGGCGCTGGG CGCATCGAAC GAATTGGAAA TTAAGCTCAA TAAAAGCACC
TACCAGGCCG ACGAAGTGAT TATTAACGCC ACCCGCGTGA ATGACAAAAC CGGGATGGCT
TACACCAACG TAACCGCCGC GCAGATCGAC AAGCAAAACC TTGGGCAGGA CCTTCCGGTG
CTGCTCAACT TCTCACCCTC GCTGGTGAGC ACGAGCGACG CAGGCGCGGG CGTGGGCTAC
TCGGGCATAC GCATACGAGG CTCCGACGCA ACGCGCATTA ATGTGACCGT GAATGGCATT
CCTTACAATG ACGCCGAAAG CCAGGGCGTG TTCTGGGTGA ATATGCCCGA TTTTGCATCG
TCGGTGAGCA GCATCCAGAT CCAGCGCGGC GTGGGAACTT CCACCAACGG CGCCGGGGCA
TTCGGGGCGT CGGTGAATAT CAATACCAAT GCATTCCGCG AAACGGCTTA CGCGGAGTTG
AATAATTCTT TCGGCTCTTT CAATACCTTT AAAAATACAC TGAAAGTCGG CTCCGGGCTG
ATCAAGGACA AGTTTACATT CGATGCACGA CTGTCGCGGG TTTCTTCGGA CGGTTTCGTG
GACCGGGCAT CTTCGGAATT GCATTCGTAC TACCTTTCCG GCGGGTATTT TGGTAAAAAG
AGCTTTGTAA GGGTGAATGT GTTTTCAGGC AAAGAGCGCA CCTACCAGTC GTGGAACGGC
GTGCCGGAGG CTAAGCTGCG CGGGAATCGG GAAGGGATAC TGGCATATAT AGACAGGAAT
GGTTTGGGTG AAAAAGATGC ACAAAACCTG CTCAATGCCG ATAACCGCAC TTACAATTCC
TATACTTATA AAAACGAAGT CGATAACTAC CGCCAGGATC ATTACCAGGT AGTTTCTTCC
CATAATCTGA GTAACAAGCT GACCTTCAAT TTGAATGCAT TCCTCGTGCG CGGCCTGGGC
TATTACGAAC AATACCGCGC CGGGGACGAT TACAGCAGTT ACAATCTCCC GAATGTTGTT
ATCGGCCAGG ACACACTCAC CAGCACCGAT CTGATTCGTC GCCGCTGGCT GGATAATTAC
TTTTACGGAA GCACATTTTC ATTTGATTAC AATAGTTTTA AAAAGATCAC CGCCAGCTTC
GGCGGCGGCT GGAACCAGTA CGACGGCGAC CATTATGGCC GGATTATCTG GGCACGTAAT
GCCGGGAACA TCGAAAACGA GCACCAGTAT TACTTCAACA CCGGCAAAAA GAAGGATTTT
AACCTTTATG GAAAGGTCTA TTACGCATTT ACAGACCAGC TCACCGCATT CGCCGACCTG
CAATTCCGCC GCGTAAGCCA CGCCATTCAC GGAATCGACA ATAACCTGGT GAACCTGGCA
TTTGATCAAT CGTATTCATT TTTTAATCCG AAGGCTGGCC TTACTTACCA ATTGGCTGAG
CAAAGCTCGG TGTACGCCTC ATACAGCGTT GGCAACCGCG AGCCTAACCG CGACGATTTC
ACGAATTCCA CAGCCCTTCT TTTCCCCAAA AGCGAACGTT TGCAAAATGT GGAAGCCGGT
TTCCGCACCC AGCAGGGCAA ATGGGCATTT GCGGCCAACT ATTATCTGAT GAGCTACAAA
AACCAGCTCG TACTCACCGG CCAGATCAAC GACGTGGGCG GCTCTGTGCG CGTGAACGTG
CCAAAAAGCT ACCGGACCGG CATCGAGCTG GAAGGAGCGG TGGTTTTCAA TAACCATTTG
AAATGGAATG CGAATGCGAC ATTCAGCCAG AACAAAATCA AAAACTTCAC CGAATACATT
GTGGATTATG ACAACGGCGG ATACCAAACC GTCGATCACG GGAAGTCGGA TATTTCCTTT
TCTCCGAATG TGATTGTAGG AAGTCAATTC ACTTACTCAT TGCGCAAAAA CCTCGAACTG
GCCTTGCTGA CAAAATACGT AGGCAAGCAA TATCTCGACA ACACCTCCAC CGAAACCCGC
AAACTGGACG CCTACCTGAC GAACGACATC CGCCTTTCCT GGACCATCAG ACCAAGCTGG
GCGAATGAAA TTGCATTCAA TTTGCTGGTG AACAATGTCC TGGACGAGAA ATACGAATCG
AATGGCTACA CCTACGGTTA CATCGCCGGC GGCGCGCTCA CGCAAGAGAA TTTCTACTTC
CCGCAAGCCG GCAGGAATTT CCTGGTTGGG GTGAATTTCA GGTTTTGA
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| Protein sequence | MRKITTYLLA LLLSATSLLS FAQKSVSGRV TDAEDGKPLP GATIKAGEIR GTSTDKDGRF
TLKNISENID ALDISYIGYQ TSKVALGASN ELEIKLNKST YQADEVIINA TRVNDKTGMA
YTNVTAAQID KQNLGQDLPV LLNFSPSLVS TSDAGAGVGY SGIRIRGSDA TRINVTVNGI
PYNDAESQGV FWVNMPDFAS SVSSIQIQRG VGTSTNGAGA FGASVNINTN AFRETAYAEL
NNSFGSFNTF KNTLKVGSGL IKDKFTFDAR LSRVSSDGFV DRASSELHSY YLSGGYFGKK
SFVRVNVFSG KERTYQSWNG VPEAKLRGNR EGILAYIDRN GLGEKDAQNL LNADNRTYNS
YTYKNEVDNY RQDHYQVVSS HNLSNKLTFN LNAFLVRGLG YYEQYRAGDD YSSYNLPNVV
IGQDTLTSTD LIRRRWLDNY FYGSTFSFDY NSFKKITASF GGGWNQYDGD HYGRIIWARN
AGNIENEHQY YFNTGKKKDF NLYGKVYYAF TDQLTAFADL QFRRVSHAIH GIDNNLVNLA
FDQSYSFFNP KAGLTYQLAE QSSVYASYSV GNREPNRDDF TNSTALLFPK SERLQNVEAG
FRTQQGKWAF AANYYLMSYK NQLVLTGQIN DVGGSVRVNV PKSYRTGIEL EGAVVFNNHL
KWNANATFSQ NKIKNFTEYI VDYDNGGYQT VDHGKSDISF SPNVIVGSQF TYSLRKNLEL
ALLTKYVGKQ YLDNTSTETR KLDAYLTNDI RLSWTIRPSW ANEIAFNLLV NNVLDEKYES
NGYTYGYIAG GALTQENFYF PQAGRNFLVG VNFRF
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