| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3399 |
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| Symbol | |
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| ID | 8226978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 4155321 |
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| End bp | 4157135 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644931230 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_003087774 |
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| Protein GI | 255037153 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCA TTCGTAACAT CGCAATTATT GCGCACGTTG ACCACGGTAA AACCACTTTG
GTCGACAAAA TCATCCACGC GTCAAAGCTG TTTCGCGACA ATCAGGAGTT CGACGACCTG
ATCCTCGACA ACAACGATCT GGAACGTGAG CGTGGGATTA CAATTGTTTC CAAAAACGTA
TCGGTGCGTT ACAAAGATGT GAAAATCAAT GTAATTGATA CACCAGGTCA CGCAGACTTC
GGTGGTGAGG TAGAACGCGT ACTTAAAATG GCGGATGGCG TTTTGTTGCT GGTCGATGCA
TTTGAAGGTC CGATGCCGCA AACCCGTTTC GTGCTCGGCA AAGCCATTGG CCTTGGCCTG
AAACCCATCG TGGTTGTCAA CAAAGTAGAT AAAGAAAACT GCCGCCCGGA AGAAGTTCAG
GAAAATGTAT TCGACCTGAT GTTCAACCTA GGCGCTACCG AAGACCAGCT CGACTTCGTA
ACCGTTTACG GTTCGTCGAA ACAAGGCTGG ATGGGCCCTG ACTGGCAGAA ACCAACCGAA
GATATTACAT TCTTGCTCGA CACGATCATT GAGCAGATCC CTGCGCCGGT GATTCCGGAA
GGTAACCTGC AAATGCAGAT CACCTCACTC GATTACAACG CATTCGTTGG CCGTATCGCC
ATCGGCCGCG TGAAAAGAGG CACCATCAAG GAAGGATCGA CCGTAACGCT TTGCAAAGCC
GGTGGTGTAA ACAAGAAGGT GAAAATCAAA GAAGTACAGG TATTCGAAGG TTTGGGTAAA
ACCAAAGTAA CCGAAGTAGG TGCAGGTGAT ATTTGCGCTG TAACCGGTAT CGAAGATTTC
GAAATCGGCG ACACCATTGC TGACGCTGAA AACCCTGAGG CACTGCCGCG CATTGCCGTG
GATGAGCCTA CTATGAACAT GCTCTTCACA ATCAACAACT CGCCATTCTT TGGTAAGGAA
GGTAAATTCG TTACCTCACG CCACATCCGC GACAGGTTGT TGAAAGAAAC CGAGAAAAAC
CTCGCATTGC GCGTGGAAAA CACGGATACG GAAGACAAAT TCCTCGTTTA TGGCCGGGGT
ATCCTTCACT TGTCGGTATT GATCGAAACC ATGCGTCGTG AAGGTTACGA ATTGCAGGTA
GGTCAGCCAC AGGTGCTTTA TAAGGAAGAC GAAAACGGCC AGCGCCTCGA ACCAATCGAG
ACATTGGTGG TAGACGTACC GGAAGAAACC GCCGGAAAAG TGATCGAATT GGCTACCCAG
CGTAAAGGTG AGCTGTTGAT CATGGAACCG AAAGGCGATT TGCAACACCT TGAGTTCGAG
ATCCCTTCAC GCGGATTGAT CGGTCTTCGT TCAAACGTAC TGACCGCCAC ACAAGGTGAA
GCCGTAATGA CCCACCGTTT CAAAAGCTTC GAGCCATTCC GCGGACCGAT CCCGGGCCGT
CTGAACGGAT CGATCATTTC GAAAAACACA GGTCCTGCAA CGGGTTACAC CCTTGATAAA
CTGCAAGATC GCGGACGTTT CTTCGTTGAT CCGGGCGATG AGATCTACGG TGGACAGGTA
GTAGGCGAGC ACAACCGCCC TAACGACATC GTGGTGAACC TGCAAGAAGC GAAAAAGCTG
ACCAACATGC GTGCTTCCGG CTCGGACGAC GGCCTGCGTA TCGCTCCGAA AATCAACTTC
TCTCTGGAAG AATCAATGGA ATACATCCAG AAAGACGAAT ACCTCGAAGT TACCCCGCAG
AACATGCGTA TGCGGAAAAT ATACCTGGAT GAAAACGATC GCAAGCGTTA TGCATCCAAA
CTGGAAATGG CTTAA
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| Protein sequence | MQAIRNIAII AHVDHGKTTL VDKIIHASKL FRDNQEFDDL ILDNNDLERE RGITIVSKNV
SVRYKDVKIN VIDTPGHADF GGEVERVLKM ADGVLLLVDA FEGPMPQTRF VLGKAIGLGL
KPIVVVNKVD KENCRPEEVQ ENVFDLMFNL GATEDQLDFV TVYGSSKQGW MGPDWQKPTE
DITFLLDTII EQIPAPVIPE GNLQMQITSL DYNAFVGRIA IGRVKRGTIK EGSTVTLCKA
GGVNKKVKIK EVQVFEGLGK TKVTEVGAGD ICAVTGIEDF EIGDTIADAE NPEALPRIAV
DEPTMNMLFT INNSPFFGKE GKFVTSRHIR DRLLKETEKN LALRVENTDT EDKFLVYGRG
ILHLSVLIET MRREGYELQV GQPQVLYKED ENGQRLEPIE TLVVDVPEET AGKVIELATQ
RKGELLIMEP KGDLQHLEFE IPSRGLIGLR SNVLTATQGE AVMTHRFKSF EPFRGPIPGR
LNGSIISKNT GPATGYTLDK LQDRGRFFVD PGDEIYGGQV VGEHNRPNDI VVNLQEAKKL
TNMRASGSDD GLRIAPKINF SLEESMEYIQ KDEYLEVTPQ NMRMRKIYLD ENDRKRYASK
LEMA
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