| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_3007 |
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| Symbol | |
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| ID | 8226580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 3674582 |
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| End bp | 3676255 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930837 |
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| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
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| Protein accession | YP_003087387 |
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| Protein GI | 255036766 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA TCTACCATCC ACTCCTCAGG ATTTTGTTCG CAGGGCTTGT CCTCAGTCAT
TCGGTTTTGG GTCAAACCAA ATCCAAAACT ACCCCTGCCG CTAACCGGCT GGCCAGGCCT
AAACTGGTAG TCGGGATGGT CGTAGATCAG ATGCGATACG ATTACCTGTA CCGGTATTAC
GACAAATACA AGGAAGGCGG CTTGAAAAGG CTTATCAATG ACGGCTTCAA CTGCCGGAAT
AACCATTATC ACTATGCATT AACGGTGACA GCCGCAGGCC ATTCGGCGGT TTACACAGGC
TCGATGCCGG CGATTAACGG CATTGTGGGT AATGACTGGT ACGACATGGC GCAGGCTAAA
AACGTGTATT GCACGGACGA TAACACCGTG GCGACAGTCG GGAGCAGCAA CGTAACAGTG
GGCAAAATGT CGCCGAAAAA CCTGCTCGTA ACCACCGTGA CCGATCAGCT CCGCATTGCG
ACGAACTTCC GTTCGAAAAC GATCGGCGTC GCGATCAAAG ACCGCGCCTC GATCCTGCCG
GCGGGCCACG CGGCATCTGG CGCTTACTGG TTCGATTCCA AAACCGGAAA CTTTGTGACG
AGCACCTATT ATATGAATTC ATTGCCGCAA TGGGTGACCG ACTATAACAG CAGCAAAAAA
CCGGCGGAAT ACATGACCAA AGGCTGGAAT GCGCTGTTGC CGATGGACCA ATATACCCAA
AGCTCGCCCG ATGACGTGGC CTGGGAAGGT AAGCTATCAA CTGCGGCGAA ACCCGTATTC
CCGCACGACC TCACGGGCAA TGCAGGCGAC GCTTACGGCC CGCTCACCAC TTCGCCGTGG
GGCAACACCA TCACCAAAGA AATGGCCATT GCGGCTATTA AAGGCGAAAA CCTGGGCAAG
GGAGCGGAAA CGGATTTTCT GGCTGTTAGT TTCTCGTCGC CGGACCGCAT CGGGCACATG
TTCGGGCCTA ATTCCGTGGA GCAGGAAGAC GATTACCTGA GGCTGGACAT GGAATTTGCC
GAGTTCTTCA AATTCCTCGA TAGCTGGGTC GGAAATGGAA ATTATACTGT GTTCCTCACG
GCCGACCATG GAGCGATGGA CGTGCCTGCG TTCTGGCAGG AGCATAAGTT GCCCGCGGGC
TTAATGGGCG CCACCACACT CACGCGCACG ATCGTCAAGG CTTTGAACGA TACTTACGGA
GAAGCCGAGT ATGTGACCGC ATTCGAGAAC TACCAGCTTT ATCTCAACAA GACAACGCTG
AAAGAAAAGA AAATCACCGT GGCGGATGTG TACCAGACGC TGCGCGACGC CCTGCTGGCT
GTGGACGGCG TTGCGGATGT GATCAACCTG CGTGATATGG GCAAGGCGCC GCTGAATACC
TATCAATTGG AACTGTTTAA AAACAACATC AACGCGAAAC GAAGCGGCGA TTTGCAGGTT
TTGCTGCAAC CGGGCTGGTT TGCATCGTCC ATGAGCACCG GCACCGACCA CGGCACGCCG
TACAACTACG ACACCCACGT GCCGTTCCTG CTGTACGGAT GGGGCATTAA TAAGGGCGAA
ACGCTTCGCC GGACGACGAT CGCCGACATT GCGCCTACGA TTTCGGCGCT ATTGCACATT
CTGCCGCCTA GCGGGAACGT TGGTAATCCG GTGGAAGAAG CATTGAAAAA ATAA
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| Protein sequence | MKLIYHPLLR ILFAGLVLSH SVLGQTKSKT TPAANRLARP KLVVGMVVDQ MRYDYLYRYY
DKYKEGGLKR LINDGFNCRN NHYHYALTVT AAGHSAVYTG SMPAINGIVG NDWYDMAQAK
NVYCTDDNTV ATVGSSNVTV GKMSPKNLLV TTVTDQLRIA TNFRSKTIGV AIKDRASILP
AGHAASGAYW FDSKTGNFVT STYYMNSLPQ WVTDYNSSKK PAEYMTKGWN ALLPMDQYTQ
SSPDDVAWEG KLSTAAKPVF PHDLTGNAGD AYGPLTTSPW GNTITKEMAI AAIKGENLGK
GAETDFLAVS FSSPDRIGHM FGPNSVEQED DYLRLDMEFA EFFKFLDSWV GNGNYTVFLT
ADHGAMDVPA FWQEHKLPAG LMGATTLTRT IVKALNDTYG EAEYVTAFEN YQLYLNKTTL
KEKKITVADV YQTLRDALLA VDGVADVINL RDMGKAPLNT YQLELFKNNI NAKRSGDLQV
LLQPGWFASS MSTGTDHGTP YNYDTHVPFL LYGWGINKGE TLRRTTIADI APTISALLHI
LPPSGNVGNP VEEALKK
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