| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2842 |
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| Symbol | |
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| ID | 8226415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 3506963 |
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| End bp | 3508486 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930672 |
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| Product | altronate oxidoreductase |
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| Protein accession | YP_003087222 |
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| Protein GI | 255036601 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00101076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0729645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAATC TCTTCCGGGA AAACCTCCGC CAGCTCAGGA ACCAGCCCGC TGTGGTCGTG
GCCGATGATT CGGTGTTCCA GCTGCCTGAA AAAGTTTTGC AGTTCGGCAC CGGCGCATTC
CTCCGCGGCC TGGCCGATTA TTTCATAGAC AAAGCCAACC GGCAAGGCGT TTTCAACGGC
CGGATCGTGG TCGTCAAATC GACCGACCAG GGCGATACCA AGGCATTTGA AAGGCAGGAT
AACCTGTACA CGATCTGTTC CCGCGGCATT CAGGATGGCG AGGCGAAGGA AGAAAACATC
ATTTCGTCGG CCATTAGCCG CGTGCTTTCG GCCAAAACAC AATGGTCGCT CGTGCTGGAC
CTCGCTAAAA ACCCAGCCGT CGGCATCGTG ATCTCGAACA CGACCGAAAC CGGCATCCAG
CTCGTACAGG ACGACATTTA CCAATGGCCG CCCGTGTCGT TTCCCGGCAA GCTGCTCGCG
TTTTTGTATG CACGTTACGT CGCATTCAAC GGCAGCGCGG ACAGCGGTGT GGTCATTATC
CCAACCGAAC TCATCGCCGA AAACGGCAAA AAACTCGAAT CTATTATCCT CGAACTCGCG
CACCGGAACG GGTTGGAAGT TGCGTTTATC GATTGGATCG AGCAATGCAA CTTCTTCTGC
AACTCGCTCG TCGACCGCAT CGTGCCCGGC AAACCCGACG AAACACGATT GAAAGAGCTG
GAAGAAGAGC TGGGCTACCG CGACGAGCTG CTGATTACCA CCGAGCATTA CCACTTGTGG
GCGATCGAAG GCGACGAGCA AATCCGGCAA AAAATCGGCT TTTACGGCAT CGACGAGGGG
CTTATCATCG AACCGGACAT TGAGCAATAC CGCGAACTAA AACTCCGCCT GCTGAACGGC
GCGCACACAT TAGGCGGCGG CCTGGCCCAT TTGTGCGGTT TCAAAACCGT GGTAGAAGCG
ATGAGCGATC CGTTTTTTTC CGCTTTTATC ACCCATCTGA TGGAAAGCGA AATTGCGACG
GCCATTCCCT ACGACGTCCG CCCCGCCGTG GCGCTGGCAT TCAGCCGCCA GGTAGCCGAC
CGCTTCCGCA ATCCGCACAT ATTGCATAAG TGGTTCAATA TCAATCAGAA TTATTCTGCC
AAGATTCTTT CACGGGTTAT CCCTACTTAC CTGAACTACG AGGCCCGGAA CGGCTACCTG
CCCGAATACA TGACATTTGG CCTGGCCGTA TTCATCCATT ATATGAAAGT GGTAAAGAAA
GAAGGCGACA ACTATTACGG TCGCCTGGAA GGAGTTCCTT ACCTGATCCA GGACCCGAAA
GCGCCTTTCT TTTATCAAAA ATGGCAAATG GCATCGCTGC CCGATATGGT GCAGGCTATT
CTCAAAGACG CGTCGATCTG GGGGCGCGAC CTCAACAAAG TTGAATCTGT CCACAGTTCC
ATTGTAAAAT ATCTTCAATC CATCGCTCAG AACGGCGTTG CGGAAACACT TAAAACGCTT
CTTGAAAGAA CAGAATATGC TTAA
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| Protein sequence | MGNLFRENLR QLRNQPAVVV ADDSVFQLPE KVLQFGTGAF LRGLADYFID KANRQGVFNG
RIVVVKSTDQ GDTKAFERQD NLYTICSRGI QDGEAKEENI ISSAISRVLS AKTQWSLVLD
LAKNPAVGIV ISNTTETGIQ LVQDDIYQWP PVSFPGKLLA FLYARYVAFN GSADSGVVII
PTELIAENGK KLESIILELA HRNGLEVAFI DWIEQCNFFC NSLVDRIVPG KPDETRLKEL
EEELGYRDEL LITTEHYHLW AIEGDEQIRQ KIGFYGIDEG LIIEPDIEQY RELKLRLLNG
AHTLGGGLAH LCGFKTVVEA MSDPFFSAFI THLMESEIAT AIPYDVRPAV ALAFSRQVAD
RFRNPHILHK WFNINQNYSA KILSRVIPTY LNYEARNGYL PEYMTFGLAV FIHYMKVVKK
EGDNYYGRLE GVPYLIQDPK APFFYQKWQM ASLPDMVQAI LKDASIWGRD LNKVESVHSS
IVKYLQSIAQ NGVAETLKTL LERTEYA
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