Gene Dfer_2597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2597 
Symbol 
ID8226169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp3203747 
End bp3204823 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content54% 
IMG OID644930428 
Productglycoside hydrolase family 76 
Protein accessionYP_003086979 
Protein GI255036358 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4833] Predicted glycosyl hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGTA TGTTCACAAC GGCGTTGGTC CTGCTCGGCA TGGCCCGCAT CGACCCCGCC 
GTATCTCAAA CCGCGCCCGA CTACAAATCG CGCCGCGGAC AGATTCTCCA CAACATTGAA
GGCGTGTTTT ACGAATCGTC GACGGGCCTT TTTATCGAAA CCAATGGCAA GAATGAGAAG
CCGCATTCGT ACCTCTGGCC ATTGTGCGCG CTGCTCCAAG CAGCCACGGA GGCGGAAGCG
GTGAGCCCCG GCAAACAGTA CATGAAGCCC GTACTCGGGG CGATCCGGCA ATATTATACC
ACCGATGCAC CCGCGCCGGG TTACCAGGCG TACGTAACGA GTGAGCAAAA GGACTCGCGG
TTTTACGATG ACAACCAATG GATCGCCATC GCGTGCCTGG ACGCGTACAA GCGCACGGGC
GAGAAGGATT ATCTGACCGT CGCAGAGGAA ATCTACCGTT TTATGATGAC CGGCTTCGAC
GAGAAGGCGG GTGGCGGCTT TTACTGGAAA GAGGACGAGA AGAATACGAA AAACACCTGC
TCCAATGGTC CCGGGATTCT GGTAGCACTG CAACTATACC AGCTCAAAAA GGACCCGGAA
TTGCTGAAAA CCGCCGTGAG CCTTTACGAC TGGACCAAAA AGAACCTGCG CGCTGCCGAT
GGCACATACT ATGACGCCAT TAAAATACCG TCCTTAAAGA TAGATTCTGC CAAATACACG
TACAACACCG GCACCATGCT GCAATCGGCC GTGCTGCTGC ATACTATTAC GGGTAAAGGC
GAATACCTGG AAGAGGCCAA AGCGCTGGCA GAAGGTTCAA AAAAGCATTT TTACAAAAAC
AATAAGCTGC CGGACAACTA TTGGTTCAAT GTGGTGCTAC TGAGAGGCTT TGAGGAGCTG
CACAAAATAG ACCCGAAAGC CGGCGATTTC GGCATATTCA TCAGCGATGC CGAGCGGATC
TGGAAAGAAG AAAGGGACGA AAAGGGCCTG CTGGGCCGCA AGCCCGTGAA GACGCTGATC
GACCAGGGCG CGATGCTCGA AATGTACGCG CGGTTGGAGC GGCTTTCAGT GAAATAG
 
Protein sequence
MKSMFTTALV LLGMARIDPA VSQTAPDYKS RRGQILHNIE GVFYESSTGL FIETNGKNEK 
PHSYLWPLCA LLQAATEAEA VSPGKQYMKP VLGAIRQYYT TDAPAPGYQA YVTSEQKDSR
FYDDNQWIAI ACLDAYKRTG EKDYLTVAEE IYRFMMTGFD EKAGGGFYWK EDEKNTKNTC
SNGPGILVAL QLYQLKKDPE LLKTAVSLYD WTKKNLRAAD GTYYDAIKIP SLKIDSAKYT
YNTGTMLQSA VLLHTITGKG EYLEEAKALA EGSKKHFYKN NKLPDNYWFN VVLLRGFEEL
HKIDPKAGDF GIFISDAERI WKEERDEKGL LGRKPVKTLI DQGAMLEMYA RLERLSVK