Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2558 |
Symbol | |
ID | 8226130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 3158234 |
End bp | 3161380 |
Gene Length | 3147 bp |
Protein Length | 1048 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644930390 |
Product | acriflavin resistance protein |
Protein accession | YP_003086941 |
Protein GI | 255036320 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.181919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA TTGAAACCAT TCTGAAGCGC CCTTCGATGA TCATCGTGTT GTTCGCGATT CTGTTCATCG GCGGGTTGGC TTCTTACAAT CAGCTCAGCT ATGTGCTGCT GCCGGAATTT TCCGTTCCGA CGATTACCAT TACCACATTA TATCCAGGCG CGGCGCCCAC GGAGGTAGAG GCCGAGGTCA GCAAGAAGAT CGAGGATGCG GTGTCCGGCC TGGATAATAT TGAAGACGTG ACTTCCAAAT CCATGGAAAG CGCCTCGCTC GTGATCGTGC AGTTTAAGGC GGGTACCGAC ATTGACAAGG CATTGGAAGA TGCCCAGCGC GATGTGAACA ACATGCTCAG CGACCTGCCC GACGATGCGG AAACGCCCTC ATTGTCCAAA ATCTCGCCGA GCGACCAGCC CATTATGCAG CTTCTGGCGA CGTCCAGCCT GCCCAACGAA GTTTTTTACC AGCAGGTAGA AGACAAATAC CTGCCGATGT TGCAGCAGAT CGAAGGCGTG GCGGAGATCA CCATGACCGG CGGCGACCAG CGCGAGATCC GTATTAATGT CAATAATGAT AAACTGCGTT TTTACGGCTT GTCGCTGTTG CAGGTGACAC AGGCCATTAA CCAGGCCAAC CTCGACTTTC CGACCGGAAA AGTAAAAAGC ACGTCGGAAA ATATGACGCT CCGACTTGCA GGTAAGTTTG CCTCGCTCGA TGACATTCGC AACCTCGTGA TCACCTCTCC CGTGAGTGGC AGCCCGATCC GCGTGGGGGA TGTGGCCAAC ATTACCGACG GCCTTACCGA CGCCGAGAGC ATCAGCCGGT ACAATGGCGT GAACGGGATT GGGTTGTTTA TCAAAAAACA ATCCGATGCC AATGCCGTGG AAATCAGTAA AACCGTGCAG GAGAAACTGG CGTCCATTGA GAAGGTGAAT GCCAAAGATA AGGTCAAATT CGCCATCGCT TACGACAGTT CGATATTCAC ACTGGAATCT GTGGAAGCGG TGACGCACGA CCTGGTGATC GCGGTAATTC TTGTGGCGGT GGTAATGCTG TTGTTCCTGC ACAGCTTCCG GAACGCATTC ATCGTAATGG TGTCGGTACC GGCCTCGCTC ATTGCCGCAT TCTTGTTTAT GTATGTGATG GGCTACTCGC TTAACCTGAT GACGCTGCTT GCACTTTCGC TCGTGATTGG TATCCTTGTG GATGACTCCA TTGTGATCCT GGAAAACATC CAGCGGCATT TGGAAATGGG TAAAAACCGC TGGGATGCCA CGGTGGAAGG AGTTACGGAG ATTGGCTTTG CGGCGTTGGC CATTACGCTC GTGATCGTGG TCGTGTTCGT GCCGATCACG ATGGTAAACT CGGTGATCGC GGACTTGCTG CGCCAGTTTT CGCTCACGGT GGCATTTGCG ACGATGGTCA GCTTGCTCGT TAGTTTTACA TTAACGCCAT GGATGACGTC CAACATGGCG AAAGTCGAAC ATTTGAACCC CAAAAATCCC GCGCAGGCTT TCCTGATCTG GTTTGAAAAA GGTTTGACGG CGTTGACCAA ATGGTACCAC GGCTCCCTGC AATGGGTGCT GGGCCATAAG CTGGCATTCT CGGGCATTCT GGTGGCGATT GTGGTGATGA CCGGCTGGGT GATGAGCCTG GGCATTATCG GGTCGGAGTT TGTGGCGGAG GGTGACCAGG GGAAATTCCT GCTCACGATG AAGCTCGACA AAAGCGCCTC ATTGCAACAA AACAACCTCA CCGCGCGAAG CATTGAAGAC TACCTGCGTC AGAAACCGGA GGTGAAAACG ATTTTCGCGA ACGTGGGCGG CGCGAGTACC GGCCTAAGCA GCTCCGGCCG CGGCGAAACC AACCGCACCG AATTGACCGT TGAGCTTACC CCCGTGTCGG AGCGCCAGAA TGCACAACCG ACGGAAGATT ATATGCTGGC CGTGCGAAAG GAATTGGAAC AAAAATTCGC TGGCGTGGAA TTCAACTCCG CGGCCATCGG GATGGTGAAT TCCGGCACGG CGCCCATTGA AATATTCCTG AGCGGCGATA ACCTGGACAA AATTCTCGCC TCTGCCAACG ACCTCGCCAA CCGCCTCCGC AAAACGCCCG GCGTAAACGA CGTGAACGTG TCCGTAGAAG CAGGTAACCC CGAAGTACGC GTGGACATCG ACCGTGAAAA AATGGCGAAA CTGGGATTGG ACATTCAAAC AGTAGGCGCA ACCATGCAGA ATGCATTCGC CGGCAACGAC GATTCCAAAT TCCGCGATGG GGGAGAGGAC TACGATATCC GCATTATGCT CGACGCATTC GACCGCAAAA ATCCGGAAGA TGTGAAGGCG ATCACATTTT ATAGCCCGGT GGCTAAGCAA TCCGTGCAGC TGGCTCAGTT TGCCGATGTA ACGCTCAGCA CTGGCCCAAG TATTGTAGAG CGCAAAAACC GTCGTTCATC CGTCACAGTC ACCGCCAATA CATTAGGGAT TGGATCGGGA ACTTTGGTGA GTAATATTCA GGCCGGTTTA AAGGAAAATC CGCTCCCGGA CGACATTATA CTTACCTGGG GCGGCGACGC CAAAAACCAG AGCGAAGGCT TCGGTTCACT GGGGCTGGCA ATGTTGGCAG GGCTCATGCT GGTATATTTC ATCATGGTGC TGCTTTACGA CAGTTTTGTG TACCCGTTTG TGGTACTGTT CTCGATCCCG GTAGCGGTGA TCGGGGCGCT GCTCGCGCTG GCATTGTCAT CGTCCAATAT CGGGATATTC GCGATGCTTG GGATGCTGAT GCTCATAGGA TTGGTGGTGA AGAATGCGAT CCTGATCGTC GACTTTGCCA ACCAGCAAAA GGCCGAGGGC GTACCGTTCC GCAAGGCCAT TCTGACAGCC GGGGAGGAGC GTCTGAGGCC GATCCTGATG ACCACGATCG CGATGGTGAT CGGGATGGTG CCGATCGCGA CTGCAACGGG CGCCGGGGCC GAATGGAAGA ATTCCCTGGC ATGGGTGCTC ATCGGCGGTC TCACCAGTTC GATGATCCTC ACGATTTACC TCGTGCCGAT GGCGTACTAC CTGGTAGATC GCCTCGGGGA AAAGTGGAAT GCGTGGCGCG CCAAGTCGGG CAGGGTACAG GAAAGCGTTG TAGTGGAAGA AATTTAA
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Protein sequence | MKFIETILKR PSMIIVLFAI LFIGGLASYN QLSYVLLPEF SVPTITITTL YPGAAPTEVE AEVSKKIEDA VSGLDNIEDV TSKSMESASL VIVQFKAGTD IDKALEDAQR DVNNMLSDLP DDAETPSLSK ISPSDQPIMQ LLATSSLPNE VFYQQVEDKY LPMLQQIEGV AEITMTGGDQ REIRINVNND KLRFYGLSLL QVTQAINQAN LDFPTGKVKS TSENMTLRLA GKFASLDDIR NLVITSPVSG SPIRVGDVAN ITDGLTDAES ISRYNGVNGI GLFIKKQSDA NAVEISKTVQ EKLASIEKVN AKDKVKFAIA YDSSIFTLES VEAVTHDLVI AVILVAVVML LFLHSFRNAF IVMVSVPASL IAAFLFMYVM GYSLNLMTLL ALSLVIGILV DDSIVILENI QRHLEMGKNR WDATVEGVTE IGFAALAITL VIVVVFVPIT MVNSVIADLL RQFSLTVAFA TMVSLLVSFT LTPWMTSNMA KVEHLNPKNP AQAFLIWFEK GLTALTKWYH GSLQWVLGHK LAFSGILVAI VVMTGWVMSL GIIGSEFVAE GDQGKFLLTM KLDKSASLQQ NNLTARSIED YLRQKPEVKT IFANVGGAST GLSSSGRGET NRTELTVELT PVSERQNAQP TEDYMLAVRK ELEQKFAGVE FNSAAIGMVN SGTAPIEIFL SGDNLDKILA SANDLANRLR KTPGVNDVNV SVEAGNPEVR VDIDREKMAK LGLDIQTVGA TMQNAFAGND DSKFRDGGED YDIRIMLDAF DRKNPEDVKA ITFYSPVAKQ SVQLAQFADV TLSTGPSIVE RKNRRSSVTV TANTLGIGSG TLVSNIQAGL KENPLPDDII LTWGGDAKNQ SEGFGSLGLA MLAGLMLVYF IMVLLYDSFV YPFVVLFSIP VAVIGALLAL ALSSSNIGIF AMLGMLMLIG LVVKNAILIV DFANQQKAEG VPFRKAILTA GEERLRPILM TTIAMVIGMV PIATATGAGA EWKNSLAWVL IGGLTSSMIL TIYLVPMAYY LVDRLGEKWN AWRAKSGRVQ ESVVVEEI
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