Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2453 |
Symbol | |
ID | 8226025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 3021415 |
End bp | 3022686 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644930285 |
Product | dihydroorotase |
Protein accession | YP_003086836 |
Protein GI | 255036215 |
COG category | [R] General function prediction only |
COG ID | [COG3964] Predicted amidohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0512688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAA AAGTACTATT CGCCGCAGCG CTCTTGTGCT CTGCCGGCAT CGCGCAAGCG CAGAAATACT CGATCGTCAT CAAAGGCGGT CATGTGATTG ATCCCAAAAA CAATATCAAC AGCATTATGG ACGTCGCCCT GAAAGGCGAC ACGGTCATGC TCGTTGCTAA AAACATCGAC GCCAAGGAGG GCGTGCAGGT GGTGAATGCG AAAGGCCTTT TCGTGACCCC GGGCCTGATC GACATGCATT CGCACAACTT CTTCGGTACC AAAATGGACC AGACTTACAG CAACGGCCCC AACGCCCTCC CACCCGACGG TTTTACATTC CGCACGGGTG TAACCACGGT GGTGGATGCA GGCTGCGCCG GCTGGAAGTC CTTCCCCGAT TTCAAGAAAC AAACCATCGA CGCATCGCGC ACCCGCGTCC TCTCATTCCT GAACATCGTG GGTGAAGGCA TGCGCGGCGG CACCTACGAG CAGAATGTCG AGGACATGGA CGCTGCCGCA ACGGCCAGGG TCGCCAAAGA ATATCCGGAA TACATTGTGG GCATCAAGCT CGCGCACTTC AACGGCTATA ACTGGACGCC CACCGACCGC GCCGTAGAAG CCGGCAAGCT CGCCAACATC CCGGTCATGA TCGATTTCGG CGGCAGCCAG CCGGTATTGC CCATTGAAGA GCTTTTCATG AAACACCTCC GCCCGGGCGA TATCTTCACG CATTGCTTCG GCCAGCTCGC CAGCCGCGAA CCGATCGTGG ACGTGAAAGC CGGCAAAGTG AAGCCGTTCG TGTATGAAGC GCGCAAAAAA GGCATCATTT TCGACGTGGG TTACGGCGGT ATCAGCTTCG CATTCTCCCA GGCGATCCCG GCCATCAAAA CCGGCTTTTA CCCCAACACC ATCAGCACCG ACATCCACAC CGGCAGCATG AACAATGCGA TGAAAGACAT GCTCAACGTG ATGTCGAAGT TCCTGGCAAT GGGCATGGAC CTGCCGGCGG TGATCAAAGC CAGCACCTGG GCACCCGCAC AAGCCATTCA CCGCGAAGAG CTGGGTAACC TCTCGGTAGG CTCGCGCGCG GACGTATCCG TGCTGCGCGT GCTCGACGGC AAATTCCAGA TGAACGACAC CGGCACATTC GGCTTCTTCG ATTACACCGG TACCAAAGTG CAGGGCAAGC AAAAACTGGA AGCAGAAGTG ACAATCCGTG CAGGCAAGGT GGTGTACGAC CTCAACGGTC TCACCAACCC GATCGTCGTT TCCAGAAGAT AA
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Protein sequence | MIKKVLFAAA LLCSAGIAQA QKYSIVIKGG HVIDPKNNIN SIMDVALKGD TVMLVAKNID AKEGVQVVNA KGLFVTPGLI DMHSHNFFGT KMDQTYSNGP NALPPDGFTF RTGVTTVVDA GCAGWKSFPD FKKQTIDASR TRVLSFLNIV GEGMRGGTYE QNVEDMDAAA TARVAKEYPE YIVGIKLAHF NGYNWTPTDR AVEAGKLANI PVMIDFGGSQ PVLPIEELFM KHLRPGDIFT HCFGQLASRE PIVDVKAGKV KPFVYEARKK GIIFDVGYGG ISFAFSQAIP AIKTGFYPNT ISTDIHTGSM NNAMKDMLNV MSKFLAMGMD LPAVIKASTW APAQAIHREE LGNLSVGSRA DVSVLRVLDG KFQMNDTGTF GFFDYTGTKV QGKQKLEAEV TIRAGKVVYD LNGLTNPIVV SRR
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