Gene Dfer_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2435 
Symbol 
ID8226007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2995633 
End bp2996694 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content54% 
IMG OID644930267 
Product6-phosphogluconolactonase 
Protein accessionYP_003086818 
Protein GI255036197 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAT TTGCACAAAA ACCCAAAAAG GAAATACTCT ACCTGGGTAC CTATACGCAG 
AAAGGCGAAG GCATTTACGT ATACGAATTC GATCGCAGCA ACTTTTCTTT TAAGGAATTG
CAGGTGGTGA CCAGCAAAAC CAGCCCGTCG TTCCTCGAAT TTCACCCCAA TAAAAAATAC
CTCTATGCCG CCAACGAAGG CAGCAATGCG GTTTCTGCCT ATGCCATCGA CCAGGCCAGC
GGCAAGCTCA CGGCATTGAA CACCCAGCCT GCGCAAGGCA AAGGCCCATG CCATGTAAGC
GTTGACCCAA AGGGGCGTTT CATTTATCTG TCGAACTACG GAAGCGGCGA TCTGGCGGTG
TATAAACTGA ACCAGGATGG CAGCATCGGT GCGCTGGCAG ATACGATCCA GGACAAAGGC
CGGCCCGACC AGAAGCCGCA TATGCACTCT ATCATTCCTT CTGCCGACGG GAAATACCTT
TACGCTTCGG ACCTCGGCAT TGACAAAATC ATGGTTTATT CCATTGATCC ACAAACCGGT
AAGCTCACGC CGGGCTCCGT TCCTTACGCA GAAGTGAAAG CCGGCGACGG TCCGCGCCAT
TTCGCCATTC ACCCGAACGG CAATTTCGGG TACTCGGCCG GTGAGCTGGC ATCCGTCGTG
AACTCGTTCA AGATCGTGAA GGGAAGCGGG GCATTGGTGC CGTTTGAGCG CGTGACGATG
CTGCCTGCCG ACTTTACCGG CAAAAGCTAC GCCGCCGACG TCCATTTTTC GCCGGACGGG
AAGTTTCTCT ACGCCTCCAA CCGCGGGCAT GAAAGCCTCG CTATCTACGG CGTCGACGCG
AAAACGGGCA AGCTCACCGT TGCCGGACAT GCCGATACGC ACGGCAAGCA TCCGCGCAAC
TTTCTCATTG ACGCAAAAGG AGAGTTTGCC ATTGCAACCA ACCGCGACAA TGACAATGCG
GTGTTCTTCA AACGCGACGC CGCTACCGGG CAATTGACTT ATACCGGGAA AGAGATCAGC
GTGCCTACGC CCGTGTGCGT GAAGCAACTG TTCCTGAACT AA
 
Protein sequence
MTAFAQKPKK EILYLGTYTQ KGEGIYVYEF DRSNFSFKEL QVVTSKTSPS FLEFHPNKKY 
LYAANEGSNA VSAYAIDQAS GKLTALNTQP AQGKGPCHVS VDPKGRFIYL SNYGSGDLAV
YKLNQDGSIG ALADTIQDKG RPDQKPHMHS IIPSADGKYL YASDLGIDKI MVYSIDPQTG
KLTPGSVPYA EVKAGDGPRH FAIHPNGNFG YSAGELASVV NSFKIVKGSG ALVPFERVTM
LPADFTGKSY AADVHFSPDG KFLYASNRGH ESLAIYGVDA KTGKLTVAGH ADTHGKHPRN
FLIDAKGEFA IATNRDNDNA VFFKRDAATG QLTYTGKEIS VPTPVCVKQL FLN