| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2307 |
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| Symbol | |
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| ID | 8225879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2854424 |
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| End bp | 2855302 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930140 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003086691 |
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| Protein GI | 255036070 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.381228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAA ATCCAGTTAC AAAATATCCA CAACCCCCAT TCAATAAACA GCCACAACCA
ATGCCGGGCC TCGCATCCAA AATGGACCCC GTTCCCGACC ATGGCGAAAA ATCATACAAA
GGTTCAGGTC GGCTGGCTGG CAGGAAAGCG CTGATTACCG GCGGAGATTC CGGGATTGGG
CGGGCGGCCG CAATCGCTTA TGCACGTGAA GGGGCCGATG TCGCTATCAA TTACCTGCCC
GATGAACAGT CCGATGCAGA CGAAGTGATT GCGCTCATTC AGGCTGAGGG TAGAAAAGCG
ATCGCTATTC CCGGAGACAT TACCAGCGAG GCTTTTTGTA AAGAACTCGT TAGCCAGGCA
GTTGAACAGC TCGGCGGGCT GGATATTCTG GTCAACAATG CAGGCCGTCA GCAGGCAGTC
GATTCACTGC TTGACATCAC TTCCGAAAGT TTCGACGCCA CGATCAAAAC GAACATCTAC
GCGCCATTCT GGATTACCAA GGCGGCATTG CCGCATCTCG CTACGGGTGC GGTGATCATT
GCCACTTCTT CTGTTCAGGC CTACGACCCG TCGGAAAATC TGTTTGACTA TGCGCAGACC
AAAGCCGCGA ATGTAGCTTT TGTTAAATCG CTGGCCAAGC AATTGGGACC CAAGGGCATC
CGTGTAAATG GTGTTGCACC GGGCCCGGTA TGGACGCCGC TGCAAACGAG CGGTGGTCAG
CCTCAGGACA AAATTGTTGA ATTCGGAAAA GCTGCCCCAT TGGGAAGGCC CGGCCAACCG
GCTGAATTGG CTTCGATATA TGTACAGCTG GCCGACCCCA ATGCCAGTTA TGCCACCGGC
CAAATCTACG GATCTGCCGG AGGAAGCGGG CATCCGTAA
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| Protein sequence | MLENPVTKYP QPPFNKQPQP MPGLASKMDP VPDHGEKSYK GSGRLAGRKA LITGGDSGIG
RAAAIAYARE GADVAINYLP DEQSDADEVI ALIQAEGRKA IAIPGDITSE AFCKELVSQA
VEQLGGLDIL VNNAGRQQAV DSLLDITSES FDATIKTNIY APFWITKAAL PHLATGAVII
ATSSVQAYDP SENLFDYAQT KAANVAFVKS LAKQLGPKGI RVNGVAPGPV WTPLQTSGGQ
PQDKIVEFGK AAPLGRPGQP AELASIYVQL ADPNASYATG QIYGSAGGSG HP
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