Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2146 |
Symbol | |
ID | 8225718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2619579 |
End bp | 2621933 |
Gene Length | 2355 bp |
Protein Length | 784 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644929983 |
Product | hypothetical protein |
Protein accession | YP_003086534 |
Protein GI | 255035913 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.292237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.414458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCTTGA TTCGCTTTTA CCGGTTTGTT CTCGTTTTAT TGCTATTAAT AGGCCATTCA AATGCCTTTA CACAGGACTT TTCGCCTGAA CAGTACAATT TGAAATGGGA TACCCAAAGT AAGAATTCCG GCGAATCGAT GCCTTGCGGA GGCGGCGATG TCGGGCTGAA TGTGTGGGTG GAAAATGGCG ATTTGCTATT CTACGTTTCG CGCAGCGGCA TTTTTGATGA AAATAATGTC ATGCCTAAGC TTGGCCGCGT GCGGGTGAGG CTTTCACCGA ATCCGTTCGA TAATGGCGAG AGCTTTCAGC AAGAGTTGAA GCTGAACGAA GGATATGTAG CAATAACCGG TAAAAAGGGC AAACTGACCG CCAAGTTAAA AGTTTGGGTG GATGTTTTCA GTCCGGTTAT CCATGTCGAA GCGGAAAGCA GCGCCCCGGT GGCGGCGCAG GCGTGGTACG AAAGCTGGCG GACGGGCCCT GGCGAGCTGA AAGGCAATGC GAGAAGTGCG AGTTCCTATA AATGGGCCGC ACCGAAAATC GCCGTTTTTC CCGACAGCGT CCGGCACGAG GACAACGGGG TGCTGTTCTA TCACCAGAAC CGCGATTCGA CGATTTTTGA TGTCATCGTG AGTCAGCAGA AGCTTGATGC AGTGAAGCCG ACGCTTTGGA ACCCGCTCAA AAACCTGACT TATGGCGGCT GGATGGGCGG TCCGAACATG GTAGCCGATC CGACGGTGGC GAATGGCAAA TATGCGGATG CTGCGTTCAG GGGATTTGGG TTGAAGACAA AATCGACCTC CAAAAACATC CGGTTGAGCA TTTATCTGCA TACCGATCAA CAGCCCAATG TGGCCGTTTG GAAAAAGGCG CTTTGGACGA CTGTCGTAAA AGCTCGCAAA GTTGAAAAGC TGGCGCATAC TAAAACGATC GAATGGTGGA AGCAATACTG GCAGCGGAGC CATATTGCAT TGAATGCCGA TAAAAAAGAC AGCGCGTCGG CGGTTTGGCA GGTCGGCCGG AACTATCAGC TATTCCGTTA CATGCTCGGT TGCAACGCGT TTGGCAGTTA TCCTACGAAA TTCAATGGCG GACTGTTCAC ATACGACCCG GTTTTTGTCG ACACTTCTTA CCATTTCAGC GCCGATCACC GGAACTGGGG CGGCGGGATA TTCACGGCTC AGAATCAGCG GCTTGTATAT TGGCCAATGC TCAAAAGCGG CGATTTTGAT ATGATGAAGC CGCAATTCGA ATTTTACCAA CGCATTTTAG GAAACGCCGA AACGCGCACA CAGCACTACT GGGGCCACAA TGGCGCCTCC TTTACCGAGC AAATCGAGAA TTTTGGTTTG CCCAACTATG CGGAATACAG CTCCAAGCGT CCGGAAGGTT TCGATCCGGG ACTCGAATAC AATAAATGGC TGGAATACCT GTGGGATACG TCGCTGGAAT TTTGCCTGAT GATCCTCGAT CAGCAGCATT TCACCGGCGC GGACATTTCG GCTTATTTGC CCCTCATTGA AAGCTGCGTG GTGTTTTTCG ACGAACATTA CCAGTACCTC GCCGCCCGCC GCAGCGCCGC CAAGCTCGAT CAGAACGGCC ATCTGGTGCT ATTCCCCGGC AGTGCGGCCG AAACCTATAA AATGGCCTAC AATTCGGTAA CGACCGTGGC CGGCCTGAAA ACCGTGCTCG AAAGAATGCT TGCATTGCCG GCGCCATACG GCAGCGAGGC GCAACGGACA CGCTGGAAGG AAATGCAGCG GCGGATACCG CCGATCAGCT TCCGCGAAAT GCAGGGGCAT CGCACGATTG CGCCCGCGCA GGCGTGGGAA CGCATCCAGA ACACCGAAAT CCCGCAGCTT TACCCGGTAT ATCCCTACGG AATGTACGGA ATCGGCAAGC CCGACCTCGA AACGGCGGTC AACACCTGGA AATACGACAC CGAAGCCATC AAAAACCGCA ACCACACCAG CTGGCATCAG GACGGCATTT TTTGCGCACG CCTGGGCCTT ACCGATGAAG CCGCCGCGCT GACGATCAAG AAACTTCAGG ACTCAGGCCG CCGCTTTCCC GCCTTTTGGG GCCCCGGCCA CGATTGGGTG CCCGACCACA ACTGGGGCGG CTCCGGCATG ATCGGTTTGC AGGAAATGCT CATGCAAACG CACGGCGATT CGATTTACAT CCTTCCCGCA TGGCCAGATA GCTGGGACGT CCGCTTCAAA CTTCACGCGC CTAAAAATAC GGTAGTGGAA GGCGAATGGA AAGGCGGTAA AATGGTGAAT CTGAAAGTGA CGCCGGTGGA GCGCCGGGGC GATTTAATAT GCTCTAAATG TGGGTTATCC GACATCAAAC GGTAA
|
Protein sequence | MPLIRFYRFV LVLLLLIGHS NAFTQDFSPE QYNLKWDTQS KNSGESMPCG GGDVGLNVWV ENGDLLFYVS RSGIFDENNV MPKLGRVRVR LSPNPFDNGE SFQQELKLNE GYVAITGKKG KLTAKLKVWV DVFSPVIHVE AESSAPVAAQ AWYESWRTGP GELKGNARSA SSYKWAAPKI AVFPDSVRHE DNGVLFYHQN RDSTIFDVIV SQQKLDAVKP TLWNPLKNLT YGGWMGGPNM VADPTVANGK YADAAFRGFG LKTKSTSKNI RLSIYLHTDQ QPNVAVWKKA LWTTVVKARK VEKLAHTKTI EWWKQYWQRS HIALNADKKD SASAVWQVGR NYQLFRYMLG CNAFGSYPTK FNGGLFTYDP VFVDTSYHFS ADHRNWGGGI FTAQNQRLVY WPMLKSGDFD MMKPQFEFYQ RILGNAETRT QHYWGHNGAS FTEQIENFGL PNYAEYSSKR PEGFDPGLEY NKWLEYLWDT SLEFCLMILD QQHFTGADIS AYLPLIESCV VFFDEHYQYL AARRSAAKLD QNGHLVLFPG SAAETYKMAY NSVTTVAGLK TVLERMLALP APYGSEAQRT RWKEMQRRIP PISFREMQGH RTIAPAQAWE RIQNTEIPQL YPVYPYGMYG IGKPDLETAV NTWKYDTEAI KNRNHTSWHQ DGIFCARLGL TDEAAALTIK KLQDSGRRFP AFWGPGHDWV PDHNWGGSGM IGLQEMLMQT HGDSIYILPA WPDSWDVRFK LHAPKNTVVE GEWKGGKMVN LKVTPVERRG DLICSKCGLS DIKR
|
| |