Gene Dfer_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2146 
Symbol 
ID8225718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2619579 
End bp2621933 
Gene Length2355 bp 
Protein Length784 aa 
Translation table11 
GC content53% 
IMG OID644929983 
Producthypothetical protein 
Protein accessionYP_003086534 
Protein GI255035913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.292237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.414458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTGA TTCGCTTTTA CCGGTTTGTT CTCGTTTTAT TGCTATTAAT AGGCCATTCA 
AATGCCTTTA CACAGGACTT TTCGCCTGAA CAGTACAATT TGAAATGGGA TACCCAAAGT
AAGAATTCCG GCGAATCGAT GCCTTGCGGA GGCGGCGATG TCGGGCTGAA TGTGTGGGTG
GAAAATGGCG ATTTGCTATT CTACGTTTCG CGCAGCGGCA TTTTTGATGA AAATAATGTC
ATGCCTAAGC TTGGCCGCGT GCGGGTGAGG CTTTCACCGA ATCCGTTCGA TAATGGCGAG
AGCTTTCAGC AAGAGTTGAA GCTGAACGAA GGATATGTAG CAATAACCGG TAAAAAGGGC
AAACTGACCG CCAAGTTAAA AGTTTGGGTG GATGTTTTCA GTCCGGTTAT CCATGTCGAA
GCGGAAAGCA GCGCCCCGGT GGCGGCGCAG GCGTGGTACG AAAGCTGGCG GACGGGCCCT
GGCGAGCTGA AAGGCAATGC GAGAAGTGCG AGTTCCTATA AATGGGCCGC ACCGAAAATC
GCCGTTTTTC CCGACAGCGT CCGGCACGAG GACAACGGGG TGCTGTTCTA TCACCAGAAC
CGCGATTCGA CGATTTTTGA TGTCATCGTG AGTCAGCAGA AGCTTGATGC AGTGAAGCCG
ACGCTTTGGA ACCCGCTCAA AAACCTGACT TATGGCGGCT GGATGGGCGG TCCGAACATG
GTAGCCGATC CGACGGTGGC GAATGGCAAA TATGCGGATG CTGCGTTCAG GGGATTTGGG
TTGAAGACAA AATCGACCTC CAAAAACATC CGGTTGAGCA TTTATCTGCA TACCGATCAA
CAGCCCAATG TGGCCGTTTG GAAAAAGGCG CTTTGGACGA CTGTCGTAAA AGCTCGCAAA
GTTGAAAAGC TGGCGCATAC TAAAACGATC GAATGGTGGA AGCAATACTG GCAGCGGAGC
CATATTGCAT TGAATGCCGA TAAAAAAGAC AGCGCGTCGG CGGTTTGGCA GGTCGGCCGG
AACTATCAGC TATTCCGTTA CATGCTCGGT TGCAACGCGT TTGGCAGTTA TCCTACGAAA
TTCAATGGCG GACTGTTCAC ATACGACCCG GTTTTTGTCG ACACTTCTTA CCATTTCAGC
GCCGATCACC GGAACTGGGG CGGCGGGATA TTCACGGCTC AGAATCAGCG GCTTGTATAT
TGGCCAATGC TCAAAAGCGG CGATTTTGAT ATGATGAAGC CGCAATTCGA ATTTTACCAA
CGCATTTTAG GAAACGCCGA AACGCGCACA CAGCACTACT GGGGCCACAA TGGCGCCTCC
TTTACCGAGC AAATCGAGAA TTTTGGTTTG CCCAACTATG CGGAATACAG CTCCAAGCGT
CCGGAAGGTT TCGATCCGGG ACTCGAATAC AATAAATGGC TGGAATACCT GTGGGATACG
TCGCTGGAAT TTTGCCTGAT GATCCTCGAT CAGCAGCATT TCACCGGCGC GGACATTTCG
GCTTATTTGC CCCTCATTGA AAGCTGCGTG GTGTTTTTCG ACGAACATTA CCAGTACCTC
GCCGCCCGCC GCAGCGCCGC CAAGCTCGAT CAGAACGGCC ATCTGGTGCT ATTCCCCGGC
AGTGCGGCCG AAACCTATAA AATGGCCTAC AATTCGGTAA CGACCGTGGC CGGCCTGAAA
ACCGTGCTCG AAAGAATGCT TGCATTGCCG GCGCCATACG GCAGCGAGGC GCAACGGACA
CGCTGGAAGG AAATGCAGCG GCGGATACCG CCGATCAGCT TCCGCGAAAT GCAGGGGCAT
CGCACGATTG CGCCCGCGCA GGCGTGGGAA CGCATCCAGA ACACCGAAAT CCCGCAGCTT
TACCCGGTAT ATCCCTACGG AATGTACGGA ATCGGCAAGC CCGACCTCGA AACGGCGGTC
AACACCTGGA AATACGACAC CGAAGCCATC AAAAACCGCA ACCACACCAG CTGGCATCAG
GACGGCATTT TTTGCGCACG CCTGGGCCTT ACCGATGAAG CCGCCGCGCT GACGATCAAG
AAACTTCAGG ACTCAGGCCG CCGCTTTCCC GCCTTTTGGG GCCCCGGCCA CGATTGGGTG
CCCGACCACA ACTGGGGCGG CTCCGGCATG ATCGGTTTGC AGGAAATGCT CATGCAAACG
CACGGCGATT CGATTTACAT CCTTCCCGCA TGGCCAGATA GCTGGGACGT CCGCTTCAAA
CTTCACGCGC CTAAAAATAC GGTAGTGGAA GGCGAATGGA AAGGCGGTAA AATGGTGAAT
CTGAAAGTGA CGCCGGTGGA GCGCCGGGGC GATTTAATAT GCTCTAAATG TGGGTTATCC
GACATCAAAC GGTAA
 
Protein sequence
MPLIRFYRFV LVLLLLIGHS NAFTQDFSPE QYNLKWDTQS KNSGESMPCG GGDVGLNVWV 
ENGDLLFYVS RSGIFDENNV MPKLGRVRVR LSPNPFDNGE SFQQELKLNE GYVAITGKKG
KLTAKLKVWV DVFSPVIHVE AESSAPVAAQ AWYESWRTGP GELKGNARSA SSYKWAAPKI
AVFPDSVRHE DNGVLFYHQN RDSTIFDVIV SQQKLDAVKP TLWNPLKNLT YGGWMGGPNM
VADPTVANGK YADAAFRGFG LKTKSTSKNI RLSIYLHTDQ QPNVAVWKKA LWTTVVKARK
VEKLAHTKTI EWWKQYWQRS HIALNADKKD SASAVWQVGR NYQLFRYMLG CNAFGSYPTK
FNGGLFTYDP VFVDTSYHFS ADHRNWGGGI FTAQNQRLVY WPMLKSGDFD MMKPQFEFYQ
RILGNAETRT QHYWGHNGAS FTEQIENFGL PNYAEYSSKR PEGFDPGLEY NKWLEYLWDT
SLEFCLMILD QQHFTGADIS AYLPLIESCV VFFDEHYQYL AARRSAAKLD QNGHLVLFPG
SAAETYKMAY NSVTTVAGLK TVLERMLALP APYGSEAQRT RWKEMQRRIP PISFREMQGH
RTIAPAQAWE RIQNTEIPQL YPVYPYGMYG IGKPDLETAV NTWKYDTEAI KNRNHTSWHQ
DGIFCARLGL TDEAAALTIK KLQDSGRRFP AFWGPGHDWV PDHNWGGSGM IGLQEMLMQT
HGDSIYILPA WPDSWDVRFK LHAPKNTVVE GEWKGGKMVN LKVTPVERRG DLICSKCGLS
DIKR