Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1887 |
Symbol | |
ID | 8225458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2323012 |
End bp | 2324397 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644929734 |
Product | signal peptide |
Protein accession | YP_003086286 |
Protein GI | 255035665 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAC CAATCAAACC CATGCTACAA TCCGGAGCTG CACAAGTTAA AACTACCCCT CCGCTGGGGA CCCGCATTAA TGGGGATTTC ATCACGCATT ATGCCACTTA CATTCATGAT CATCTGTATT CCAAAGCGCT TGTTTTGAAA TGCGATGATA CCGTCGTTGC TTTGGTGGTG GTGGATATTT GCGTGATGCC GAAAGAGTTT CTGGATCCTG TGAAAGCGGA TATAACCCGT ATGACAGGTA TTCCTGCTTC CCACATCCTG ATTTCAAGTA CGCACACGCA CGCGGCGGGC TCGGTTGCGG ATGTGCATCT GGGCAGCGTG GATCCGGCTT ATGCGCAAAA GTTGCCGGGG CTGATTGTCG AGTCAGTCCG GCTGGCTATC CAAAATCTCC GACCTGCGCA GCTGGCATTC GGCAGTGTAC GGGCCCCGGA GCATTTGCTT TGCCGGAGAT ACGAAATGCA GGCAGATTAC CGCCCATTCA ACCCGGTTTC GGGCGGGGAT GATCTGATTA AGACCAATCC ATTTGGCGCA GAAAGCAGCA TTCTCAGAAG TATTGCTCCC ACCGATCCGG AATTGGGTTA CCTGGCAGTG CGAGGTACGG ACGGCCGTTG GATCGGTTTA CTGGCAAATT ATTCGTTGCA TTATGTGGGC GATTGGGAGA ATGGGACGAT TTCGGCAGAC TATTTCGGGG TGTTTGCCAG GGCACTCGGC GACAAACTCC AGGCAGGGCC GGAGTTTGTC GGGATGATGA GCAATGGTAC CAGCGGAGAT GTTAATATCT GGGATTTTAT GTACTCTGAG CGGTATCCTA AGGCGCATTT TGCAAAAAGC GAGCTGATAG GTTCTGATCT GGCCGGGCGG GTTTTTCAGA GTATGGATAC ATTGGAGTGG AAATCGGAAG TGCTGCTGGA CGCGGCTTTG GAGCTTGTCT CTATTCCGGT TACCAAACCC AGTTCCCGGG AACTTGAAAT AGCAGCCGGA CTCCTGGCCG GCGCGCATTT TGAAACCATT GAACCGGATC AGGAAGGTTT GAAGCGGATT TATGCGAGAG AGCAGATATT GCTCAATGAA ATGCCCGACC GGCGCGAATG TCCTGTGCAG GTGATCAGGA TAGGCGATGG GATGATAGGC GGACTGGCAG GGGAATTTTT TTCGGAAACG GGACTGCGCC TTAAAGAAAA TTCCGTGGCA GCGCACTATT TCACGATCAG CATGGCCAAT GGGAATGTAG GTTATGTACC TCCGGCGCAG GAAATTGCTA GGGGAGGATA TGAAACTTGG CGCTGCCGTT ACAGCTGCCT TGCGCCAGGA GCGGAAGATA CGATCCGTGA AAAGCTGCTC GTATTGGCAA AAACCCTCGC AGCTGCCCAC CGCTGA
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Protein sequence | MPKPIKPMLQ SGAAQVKTTP PLGTRINGDF ITHYATYIHD HLYSKALVLK CDDTVVALVV VDICVMPKEF LDPVKADITR MTGIPASHIL ISSTHTHAAG SVADVHLGSV DPAYAQKLPG LIVESVRLAI QNLRPAQLAF GSVRAPEHLL CRRYEMQADY RPFNPVSGGD DLIKTNPFGA ESSILRSIAP TDPELGYLAV RGTDGRWIGL LANYSLHYVG DWENGTISAD YFGVFARALG DKLQAGPEFV GMMSNGTSGD VNIWDFMYSE RYPKAHFAKS ELIGSDLAGR VFQSMDTLEW KSEVLLDAAL ELVSIPVTKP SSRELEIAAG LLAGAHFETI EPDQEGLKRI YAREQILLNE MPDRRECPVQ VIRIGDGMIG GLAGEFFSET GLRLKENSVA AHYFTISMAN GNVGYVPPAQ EIARGGYETW RCRYSCLAPG AEDTIREKLL VLAKTLAAAH R
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