| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1669 |
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| Symbol | |
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| ID | 8225240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2031239 |
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| End bp | 2033710 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929524 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003086076 |
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| Protein GI | 255035455 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.306127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATTGA AACACGCTTT ACGCATCGCA GCCATCGCCA CGCTGTTCCA TTTCAGTACG
AATGCCCAGA CGACGGCTAC CAGGAAGGCG ACGATTAAAG GAAAAGTGAA GGACGAAAGG
GGCGCGGTGG TGAGCTTTGT CACGGTGCGT GTGGGCGATT CCAACATCGC TACGTTCTCT
GAAACCGACG GGACATTTCA GCTGAAAGAC GTGCCTTACG GACATCAGGA CATCGTGATC
ACATCGGTGG AGATCGAAAC CAAAAAGCTG AAACTCCATG TGATCAAGCC CACGCACGAG
CTCAACCCCG TGGTGGCTAG GACCGCGCAG GAGCTCAGCG AAGTGAATAT TGTCCAAAAG
ACGGAAAAGA AGCAGATCGA AACGCAGGGC TTTGCCGTGG CGGTGATCGA AACGAAAGAA
GCATCGCTCC GAAACCTGAA CACGAACGAA CTGCTCGACC GCTCGGTAGG CGTGCGCGTC
CGGCAGAACG GCGGGATCGG CTCACGGGTA GAGTATAACC TGAATGGCAT GTCGGGCAGC
GCGGTCGGGA TTTTCCTCGA CGGGATCGAA ATATCGACCT ACGGATCGTC CTTCAACCTG
AACAATATTC CGCCGGCGAT GATCGAGCGC ATCGAGGTGT ACAAGGGCGT GCTGCCCGCG
CACCTCTCGG GCGACTACGT GGGCGGGGCC ATTAACGTGG TGCTCAAAAA GGACGCTTCG
CAAAACAACA TTACCGCGGC CGTTGCCTAC GGGTCATTCA ATACCTTTCA GGCGGACCTG
TCCGGAATTT ACCGGAACAA GCGTACGGGC TTCACAACGA GGGGCTCGGG CTTTTATACG
TATACCGATA ATAGTTACAC TACCTGGGGC AAGTTCTCGA AGTTTGTACA CCCCGACAGG
ACCCTTGAAC GCTACTATCG CGCCAAGCGC TTCAACAATG CCTACCGGAC GGTCGGCGGG
CGTTTTGAGG TCGGTTTTAC CAATGTTAAC TGGGCGGACC AGTTTTTTGT AGGCTACAAC
GTGTCGGACA CTTACGCCGA CATTCCACAC GGTACCACCA TGGCGCGGCC TTATGTGGGA
CGGTTTGGCG AGTACCAGGC GCATGTGGTG AGTTTGAATT ATAACAAAAA TAATTTCCTG
GTAAAAGGCA TGGCGCTGAA TGTGAACGCC GTGAGAAGTT ACCGCAGCAC CTACGTGCAG
GACACGGTAG GGCAGGTGTA CAACTGGGAC GGCAACCCGC GCATGCTCAT CCGCAATGGA
GAGGTGATCC CCGTGCCGCC CACGCCCGGA ATGGGCCAGC AGGGAGCGAA AAGCATTGTG
GAGGTGAACC GCAAGATCAC CAACATGCGC TCGAACCTCG GCTACACCAT CTTCCCCGGC
CATCGGATAT CCCTGAACCA CAAGCTGGAA GCGACCGACC GAGATGATAA CGACCTGCTC
AACTCGGTGA ACAAAGACCT CGTGACGGTG AGTAATGTAA TGACCAACAT CGTTGCGCTG
AACTACGAGG CGCAGGTGCT GAACGACAAG CTGAAAACCA ATATTTTAGG AAAATACACC
TCCAACCGCA CCATCCAGAC GAAGCCGGAA CTGGTGGAAC AGGACGGCGA GAATGTGGTG
AACCGGGTGG AAAGTAAAGC GGTGAACAAC AATTTCGGAT ATGGAGCCAC AGTGTCGTAC
AATGTGTTTT CCAAAATGTA TGTCATCGGC TCCACGCAAA ACTCCTATGT ATCGGCAACT
GAAAACCAGC TCTACGGCGA CCCTGAGAAT AACATTCTCG AAAACCTGGA CCTGGTGCCC
GAGAAGAACA TCAACTACAA CCTCGGCTTC CGGCACGGAC CCATTCAAAC GGGCAAGCAC
AAGCTCACGC TCTACGCGAG CGCATTCTGG CGGAACGGTT ATAACAAAAT CACCCAGCAG
GCGGTGGAAG ATCAGATCAT CCCCGGCCGC GAAAGCGACG CGGATATCCA GGTGACGAAA
TATGTAAACA TCGGACGGAC ACAGTCGAGA GGTTTTGAAG GAGAGATCAT TTATGTGTAC
GACAATCGTT TGAATGCGCT TTTCAACTTC TCCAAGTTCG CCACACTGTT CAAGCAAAAG
ACCGACCAGA AGGGCAACCC GCACGATTTG TACGACTTAC AATTACCCAA CGAGCCGTTT
TTCACAATGA ACGGCAGCGT GCAATACCGG CTGAATGACA AGTTCCAGAA AAAATCCATC
CTGAACCTTT ATTATAACAC CGGCTACGTA GCGCCATTCA ATACGGTTTG GATGGAATCG
GAATGGTTTA CGACACCCAC GCAATTCTAC CACGACATTG GCGCGAGCTA CCGCTTCCCC
AGCGGCAAAA TGGTAGCCAG CCTCGACCTG AAAAACATTC TCAATGCCGA AATGTATGAC
AACTTCGGCG TGCAGAAGCC CGGCAGAAGC ATATCCATCA AATTGAATTA TACAATCAGT
AAATTTCTAT AA
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| Protein sequence | MLLKHALRIA AIATLFHFST NAQTTATRKA TIKGKVKDER GAVVSFVTVR VGDSNIATFS
ETDGTFQLKD VPYGHQDIVI TSVEIETKKL KLHVIKPTHE LNPVVARTAQ ELSEVNIVQK
TEKKQIETQG FAVAVIETKE ASLRNLNTNE LLDRSVGVRV RQNGGIGSRV EYNLNGMSGS
AVGIFLDGIE ISTYGSSFNL NNIPPAMIER IEVYKGVLPA HLSGDYVGGA INVVLKKDAS
QNNITAAVAY GSFNTFQADL SGIYRNKRTG FTTRGSGFYT YTDNSYTTWG KFSKFVHPDR
TLERYYRAKR FNNAYRTVGG RFEVGFTNVN WADQFFVGYN VSDTYADIPH GTTMARPYVG
RFGEYQAHVV SLNYNKNNFL VKGMALNVNA VRSYRSTYVQ DTVGQVYNWD GNPRMLIRNG
EVIPVPPTPG MGQQGAKSIV EVNRKITNMR SNLGYTIFPG HRISLNHKLE ATDRDDNDLL
NSVNKDLVTV SNVMTNIVAL NYEAQVLNDK LKTNILGKYT SNRTIQTKPE LVEQDGENVV
NRVESKAVNN NFGYGATVSY NVFSKMYVIG STQNSYVSAT ENQLYGDPEN NILENLDLVP
EKNINYNLGF RHGPIQTGKH KLTLYASAFW RNGYNKITQQ AVEDQIIPGR ESDADIQVTK
YVNIGRTQSR GFEGEIIYVY DNRLNALFNF SKFATLFKQK TDQKGNPHDL YDLQLPNEPF
FTMNGSVQYR LNDKFQKKSI LNLYYNTGYV APFNTVWMES EWFTTPTQFY HDIGASYRFP
SGKMVASLDL KNILNAEMYD NFGVQKPGRS ISIKLNYTIS KFL
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