Gene Dfer_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1435 
Symbol 
ID8225006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1693792 
End bp1696164 
Gene Length2373 bp 
Protein Length790 aa 
Translation table11 
GC content57% 
IMG OID644929294 
Producthypothetical protein 
Protein accessionYP_003085846 
Protein GI255035225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.931563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0505935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAATA CGTTACTTTC CAGCCTCTCC CTGCTGCTCT TCGCGGCTAC CGCATTGGCC 
CCGCTGCAAG CGCAGCCTAC TTCCAAGACC GCACCCTTAT CGCTCTGGTA CGACCAGCCC
GCAAAAGAAT GGATGACGCA GGCATTGCCG ATCGGTAATG GCCATGTCGG GGCCATGTTT
TTCGGCGGGA CGGACGAAGA ACGCATTCAG TTCTCGGAAG GCAGCCTCTG GGCAGGCGGT
AAGGGCGCGA ATGCGGATTA TAATTTTGGT ATAAAAAAAG AAGCTCATAA ACATTTGCCC
GAAGTGCGCG AACTGCTCGC AGCCGGGAAA TTGAAGGAGG CGCACGCACT GGCGAACAAA
GAACTCACCG GCGCGATACA TGAAAAGAAG GAAAATACGC CTTCCTCCGA TTTCGGCGCG
CAGCAAACGG TGGGCGATCT TTTCATTAAA ATGCCCTCCA AAGGCGCCGC GCAGAACTAC
CGCCGCGAAC TGAATATTTC CGACGCGCTG GGCAAAGTGC AGTACGAAGC AGGCGGTACG
CGGTTTGAAA GAAGCTATTT CGGCAATTAT CCAGCCAAAG TAATGGTGTA CCGCTTCACA
TCGTCGACGC CCGAAACCTA CTCAATCCGC TTCGAAACGC CGCATGCGAA GGATTATGAG
CGCTTTGAGG GCAAGCAGTA CACATTCGGC GGGCATTTGA AGGATAACCA CCAGGAGTTC
GAAACCGTGT ACCGTATTGA TACCGACGGT AAAACGGCTT TCAGCGATGG CGTGCTCACG
GTGACAGGCG CCAGGTCCAT TGTCCTGATC CACACCGTGG CGACGGATTA TGTGATGAAA
TTCCCTGATT ATAAAGGCAA CGACTACAAA AAGGCCAATG CCGCAACCAT GGCCGGAGTG
GCCGGAAAAA ACTACGCGTC GCTGGTCGCC GCGCAGCAGA AAGATTACCA CAGCCTGTTC
GATCGCGTGG CGCTCACATT AGGTAATGCC GACGCGCCCG CTATCCCGAC GGACCAGCGG
CAAAAGGCCT ATTCGGCCGG ACAGGCCGAT GGCCGCCTGG AAGAACTGTA TTTTCAATAT
GGTCGCTACC TGATGATCTC GTCCACGCGC CCCGGCACGA TGCCCATGAG CTTGCAAGGC
AAATGGAACG ACAGTACCAA TCCCCCCTGG GCGAACGATT ATCATACCAA TATCAATATT
CAGATGCTCT ACTGGCCTGC GGAGGTGACG AATTTGTCCG AATGCCATGT GCCGCTGATG
GATTTCACGC AGTCCATTGT AGCGCCGGGA CGGCTTGCTG CGAAGGAGTT TTTCAATGCA
AAAGGCTGGA TCGTGAACAC GATGCTGAAC GCCTACGGGT ATACCTCGCC GGGCTGGGAT
TTTCCGTGGG GCTTTTTCCC GGGCGGTGCG GCGTGGCTCA GCCAGCATTT GTGGGAGCAT
TATGCATTTA CCAACGACAA GGCATTCCTG AAAAACACAG CCTATCCGAT CATGAAGGAG
GCGTCGGAGT TCTGGATGGA TTATCTTACT GACGACGGCA GGGGCCGGCT GGTGTCGTCT
CCGTCGTACT CGCCCGAGCA TGGCGGCATT TCAACCGGCG CCACCATGGA CCATGAAATG
GCCTGGGACG TGCTCAACAA CACCGCCGAG GCTGCCGCAA TACTGGGTGT CGACCAGGAT
TTTGCGCAAA AAGCCCGCAG CACGCGCGAC AAGATCCTGC CGTTGCAGAT CGGCCGCTGG
AAGCAGTTAC AGGAATGGCG CGAAGACGTG GACGATTCCA CGAATCACCA CCGCCACGTT
TCGCATTTGT TTGCATTGCA CCCGGGCAAG CAGATTTCCA ATGCGCAAAC CCCGGCCGAG
GCCGAAGCGG CTCGGGTGAG CCTGAATGCC CGCGGCGACG ACGGCACGGG CTGGTCGCTG
GCGTGGAAAG TGAATTTCTG GGCGCGCTTG CAGGATGGTA ACCGCGCGCA TAAGTTGTTC
AAAAGCGTGC TGAGGCCTGT GGCAAGCCAG GGAACCAACA TGGCCGACGG CGGCGGATCG
TATGCCAATC TCCTTTGCGC GCATCCGCCA TTCCAGCTAG ACGGTAACAT GGGCTCCACG
GCGGGCGTGG CCGAAATGCT TCTGCAATCG CAAACCGGCG TGATCGAACT CCTGCCCGCA
TTGCCCGACG CCTGGCCGAC CGGCTCCGTG AAAGGATTGA AAGCGCGGGG CAATGTAACG
GTCGACGAAG TTTGGGAGAA TGGAAAACTG AAAACGGTGA CCCTCACGTC GGCCACCGCG
CAGAAACGTG TGCTGAAATA CGGTAGCAAA ACGATCGACG CGGCATTAGC GGCCGGGAAG
GCAAAAACCT GGACGGCAAA CGATTTCAGA TAG
 
Protein sequence
MHNTLLSSLS LLLFAATALA PLQAQPTSKT APLSLWYDQP AKEWMTQALP IGNGHVGAMF 
FGGTDEERIQ FSEGSLWAGG KGANADYNFG IKKEAHKHLP EVRELLAAGK LKEAHALANK
ELTGAIHEKK ENTPSSDFGA QQTVGDLFIK MPSKGAAQNY RRELNISDAL GKVQYEAGGT
RFERSYFGNY PAKVMVYRFT SSTPETYSIR FETPHAKDYE RFEGKQYTFG GHLKDNHQEF
ETVYRIDTDG KTAFSDGVLT VTGARSIVLI HTVATDYVMK FPDYKGNDYK KANAATMAGV
AGKNYASLVA AQQKDYHSLF DRVALTLGNA DAPAIPTDQR QKAYSAGQAD GRLEELYFQY
GRYLMISSTR PGTMPMSLQG KWNDSTNPPW ANDYHTNINI QMLYWPAEVT NLSECHVPLM
DFTQSIVAPG RLAAKEFFNA KGWIVNTMLN AYGYTSPGWD FPWGFFPGGA AWLSQHLWEH
YAFTNDKAFL KNTAYPIMKE ASEFWMDYLT DDGRGRLVSS PSYSPEHGGI STGATMDHEM
AWDVLNNTAE AAAILGVDQD FAQKARSTRD KILPLQIGRW KQLQEWREDV DDSTNHHRHV
SHLFALHPGK QISNAQTPAE AEAARVSLNA RGDDGTGWSL AWKVNFWARL QDGNRAHKLF
KSVLRPVASQ GTNMADGGGS YANLLCAHPP FQLDGNMGST AGVAEMLLQS QTGVIELLPA
LPDAWPTGSV KGLKARGNVT VDEVWENGKL KTVTLTSATA QKRVLKYGSK TIDAALAAGK
AKTWTANDFR