Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1159 |
Symbol | |
ID | 8224730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1379052 |
End bp | 1380449 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644929021 |
Product | outer membrane efflux protein |
Protein accession | YP_003085573 |
Protein GI | 255034952 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.78186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCATGA CGTCAAAGAA GTATTTTCCC TCCCTGCTGC TGGCCCTTTC GCTGGGCGGT GCCGGTGAGA AGCTGTGTGC CCAAACACTT ACATTAGAGC AGGCCGTAGA GACCGCCGTG AGCAATTACG GCAGCATTAA GGCCAAAAAT AATTACCTCA ATGCTTCGAG AGCGACGGTA ATCCAGAGCC GGAAGGAATA CCTGCCCAAT TTCAACCTCT CCGCGCAGCA GGACTACGGC ACGGTCAACG GCCAGAACGG CCCGCTTTAC GGCATGGGGC TATCGGTAGC TTCGTCGGGG CTGCCGCTGC CGGACCAAAA CTGGAACTCC GCATTCGGCG CACTGTACCT GACGAACGTC AACTGGGACT TCTTCGCATT CGGCCGTGCA CGTGAACGCA TTCACGTAGC GCAGTCGGCC GTGAACCGCG ACCGTGCCGA CCTCGACCAG GAACAGTTCC AGCACAGCGT GCGCGTGGCC GGGGCGTATC TCAACCTGCT TGCCGCCCAG CGGCTCATCC GGTCGTGGGA AAACAACCTG GAACGCGCCA ATGCATTGAA AACCGTAGTG GTAACCCGCG CAAAAAACGG GTTGATCCCC GGCGTGGACT CTTCGCTGGC CAATGCGGAA GTGTCGAATG CCAAGATCAG CATCACACAG GCGCGCGATT TCGAGCAGGA ACAGGCCAAC ATCCTGGCCC GGCTGATGGG CGTCACCGAG CAGCGTTTTC AGCTCGATAC ATTGCTGCTC TCCCGAACAC CGCGCATGGC CGCCGAGCCG GCCGGTAAGC CCGAGAACCA CCCGTTGCTG CGGTTTTATT CCAACCGCAT TGCCGTAAGC GAGCAGCAGG CCAAATACTT CCACACCCTT GCGATGCCTA CATTCTCGCT GTTTGGCGTG TTTCAGGGTC GCGGAGCAGG TTTTTCATCC AGCTACGCCG CCGACCAGAC GGCCTACACA CACAATTATT TCGAGGGTAT CAAACCGGTG AGGTACAATT ATCTGCTGGG GATCGGCGCT ACCTGGAACA TGACGAGCAT GCTGCGGGTC CGGCAGCAGG TCATGTCACA GAAATTCATT TCCAATGCAT TGAAAGAGGA ATACGACCTG GCCGATCAGC AATTGAAAAA CCAGCTGATC CTCTCCGAAA CGAAGATCAG CAATGCTATT GCCAATTACC GTGAGGCGCC GGTACAGGTA CGATCGGCTT CCGACGCCTA TTTGCAGAAA AGTGTTTTGT ATAAAAACGG CCTCAGCAAT ATCGTGGACA TGACGCAGGC CCTCTATGTG CTCAACCGCG CCGAAACAAG CCGCGACATC GCCGCCACAA ACATCTGGCA GGCGATATTA CTCAAAGCAG CGGCAAGCGG CGACATCGGC ATTTTTCTGA ATCAGTAA
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Protein sequence | MPMTSKKYFP SLLLALSLGG AGEKLCAQTL TLEQAVETAV SNYGSIKAKN NYLNASRATV IQSRKEYLPN FNLSAQQDYG TVNGQNGPLY GMGLSVASSG LPLPDQNWNS AFGALYLTNV NWDFFAFGRA RERIHVAQSA VNRDRADLDQ EQFQHSVRVA GAYLNLLAAQ RLIRSWENNL ERANALKTVV VTRAKNGLIP GVDSSLANAE VSNAKISITQ ARDFEQEQAN ILARLMGVTE QRFQLDTLLL SRTPRMAAEP AGKPENHPLL RFYSNRIAVS EQQAKYFHTL AMPTFSLFGV FQGRGAGFSS SYAADQTAYT HNYFEGIKPV RYNYLLGIGA TWNMTSMLRV RQQVMSQKFI SNALKEEYDL ADQQLKNQLI LSETKISNAI ANYREAPVQV RSASDAYLQK SVLYKNGLSN IVDMTQALYV LNRAETSRDI AATNIWQAIL LKAAASGDIG IFLNQ
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