| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0975 |
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| Symbol | |
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| ID | 8224545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1132337 |
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| End bp | 1134757 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928836 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003085389 |
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| Protein GI | 255034768 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.608799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.162482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAA AATTATTTCT ACTCGCAATG CTGTTCGGTT GTGTCGCTGG GAGGGCGTTT
GCGCAAAATG GTTCTGTCAG CGGCGCCGTG CGTACTTCCG ATGGTGAACC GGTGGAGCTC
GTCACCGTGA ATGTGAAAGG CACTTCCAAA GGCGCTTTGA CCGACCGGAA CGGAAAGTTT
TTTATCCGAA ATTTGCAGCC CGGCTTGCAG CGCCTCGTGG CTTCGTTCGT CGGGCTGGAT
AAGCAGGAGC AAACCGTCGA GGTGACTGCC GGGGGCACTG TCACGCTGGA TTTTGTGCTC
AAAGCAAGCT CGGCGCAGTT GCAGGAAGTG ATCGTCTCGG GGCGGAACCT GAACCGCGAG
AATGCCATTG TGGCCAAAAT TCCTTTGAAA AAGCTCGAAA ATCCACAGGT TTACAACACG
GTGTCCGCCG AAATTATGAA GCAGCAGGGC ATTACGAGCT ACGACGATGC GCTCCGCAAT
GTGCCGGGCA TTGCCCGTAC GTGGGAGTCG ACCGGCCGGG CAGGGGATGG GGCTTCGTAT
TTCGCATTGC GCGGGTTTGA TGCGCAGCCG ACACTCTACA ACGGCCTTCC GGGCCTCACA
AGCGGTAATC TCGACCCGGC GAATGTGGAG GAGATCCAGG TGATCAAGGG GCCGTCGAGC
ACGCTCTTCG GCGGGGCGTT TTACAGCTAC GGCGGGATGA TCAATACGAT CACCAAAAAG
CCTTATCACC AGTTCGGGGG CGAGATCGCG TATAACGCCG GGAGTTTCGG GCTGAACCGC
GTCACGGCCG ACATTAACAC GCCGCTTAGC AAGGCGGATA AGATCGCGCT GCGCGTTAAT
ACCGCCTACC ATTCCGAAAA CAGTTTTCAG GACGCAGGGT TTAAAAAGTC GTTTTTTATC
GCGCCTGCAT TGGTGTATGA GGTGAACGAC CGCCTTTCGC TGCATTTGCT GGCCGAATTC
CTAGAAGAAG AACGGGCAGT GGCACCAGTA TTCTTCCATT CCGACCGGCT CAGCCCGCTT
CCTTTCAAAA ATCTCCGGGA TCTGAACCTG AACCCGCGCC TTTCGTTCAC TTCAAACGAC
CTTACGATCC GTAATCCGCG TTTTAATCTG CAAGCGCAGG CCGTTTACAA GCTGTCGGAC
CAATGGACGT CGCAAACTGT TTTTTCAAGA GGCGCGGTGA AGTCCGATGG CATTTATACC
TACATCTGGG ACGATGTGTC GGGGGATAAC TGGTTTAGCC AATACTTTCA CAAAGAGCAG
CAATCGACCA CTACAACCGA TATCCAGCAG AATTTCAACG GCGATTTCAA AATCGGCAAC
ATGCGTAACC GGCTACTGGT AGGCGTGGAT TATTTCAGAC GAAACGTGGT CGATAATGGC
TCCGGCTGGG CTTCGGCGAG GAATGTTTCG CCGCAGGGCG AGGTAAATTA TGTGAACCCT
TACTCGGGCG ATACGCTTGC GCCCGTGTAC CTCACGCAGG CGTCGATCGA CAATCTGCTG
GCCGGGCTCG AAGGAAGTGC GAGCAATATT ACCAACACGT CGTTCGGAGC GTATGCGTCC
AACGTGCTGA ATATCATGCC GAACCTGAAT GTAATGCTGA GCCTCCGTGC CGATTATTTC
GATTCAAAAG GCGAGAGAAG TACTTCCGAA GACGATTTTG ACCAATGGGC ATTGTCGCCT
AAAATCGGGA TCGTGTACCA GCCGCTGCCC GACAAGGTTT CGCTTTTTGC GAACTACATG
AATGCGTTCA TCAACGTGGC GCCGCAGCAG GTGACCGATC GCGACGGGAG CAACCCACGC
ATCAAGTCGT TCCGCCCCGA GCATGCGGAT CAATGGGAGT ATGGGATTAA AACCAACCTT
TTTTCCGACA AGCTGGGTGC CACGCTTTCG GTGTACGATA TCAAGGTGTC GGACCGTGTT
ATGCCCAATC CGGCCAATAT CCGCGATTTT ACACAAGGCG GAAAGGTCGG CAGCAAAGGC
TTTGAAATTG ATGTCGTGGC TAATCCTGTC AATGGTCTCA GCCTGATCGC CGGTTTCAGT
CACAACAAAA CGAAAGTTAT TTCGGGCGAT GCGGAAGATT TTTACAGTGA ACCCGGACGT
TCGATAGGAG GGCAGGGGCC TCAAAACCTG GCTAATTTCT GGGCGACCTA TCGCATAAGC
AGCGGCACGT TGAAAAATGC CGGTTTCGGT TTCGGAGGAA ATTACGCCGG CGAATACAAG
GTGATCGACA ACAGCAAAAC AGGCGTTTTT ACGCTCCCAG CCTACACACT GCTGAATGCG
AGCGTGTTTT ATAATGCCAG CCATTTCCGG ATTTCATTGA ATGTAAACAA CCTTACCAGC
AAGGAATATT ACATCGGCTA CTGGTCGGTA AACCCGCAGA AGCCGAGAAA TTCTACATTG
AGCATTGCCT ATAAATTTTA G
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| Protein sequence | MTKKLFLLAM LFGCVAGRAF AQNGSVSGAV RTSDGEPVEL VTVNVKGTSK GALTDRNGKF
FIRNLQPGLQ RLVASFVGLD KQEQTVEVTA GGTVTLDFVL KASSAQLQEV IVSGRNLNRE
NAIVAKIPLK KLENPQVYNT VSAEIMKQQG ITSYDDALRN VPGIARTWES TGRAGDGASY
FALRGFDAQP TLYNGLPGLT SGNLDPANVE EIQVIKGPSS TLFGGAFYSY GGMINTITKK
PYHQFGGEIA YNAGSFGLNR VTADINTPLS KADKIALRVN TAYHSENSFQ DAGFKKSFFI
APALVYEVND RLSLHLLAEF LEEERAVAPV FFHSDRLSPL PFKNLRDLNL NPRLSFTSND
LTIRNPRFNL QAQAVYKLSD QWTSQTVFSR GAVKSDGIYT YIWDDVSGDN WFSQYFHKEQ
QSTTTTDIQQ NFNGDFKIGN MRNRLLVGVD YFRRNVVDNG SGWASARNVS PQGEVNYVNP
YSGDTLAPVY LTQASIDNLL AGLEGSASNI TNTSFGAYAS NVLNIMPNLN VMLSLRADYF
DSKGERSTSE DDFDQWALSP KIGIVYQPLP DKVSLFANYM NAFINVAPQQ VTDRDGSNPR
IKSFRPEHAD QWEYGIKTNL FSDKLGATLS VYDIKVSDRV MPNPANIRDF TQGGKVGSKG
FEIDVVANPV NGLSLIAGFS HNKTKVISGD AEDFYSEPGR SIGGQGPQNL ANFWATYRIS
SGTLKNAGFG FGGNYAGEYK VIDNSKTGVF TLPAYTLLNA SVFYNASHFR ISLNVNNLTS
KEYYIGYWSV NPQKPRNSTL SIAYKF
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