| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0952 |
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| Symbol | |
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| ID | 8224521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1105648 |
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| End bp | 1106886 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644928815 |
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| Product | integrase family protein |
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| Protein accession | YP_003085369 |
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| Protein GI | 255034748 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.571908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0199815 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTATGA AAACAAAGCT GAGTCTGCTT TTCTATTTGA AGAAGCCGAG AAATTATCAA
ACCGGGCCTA TGCCCATCTA CCTAAGGATT ACCGTTGAGA GTAAGAGGTC AGAACTTGCG
ACCGGACGTG AGTGCGACCC TAAGACCTGG AATACGGGGG CAGGTCGGGT TCTAGGTAAC
AAGGAGGCCG TGAAATCACT CAACGCTTAT TTGGGCAACC TTGAACAACA ATTCCTGGAC
GCACATGCTT CCTTAATTCG CCAGGGCGAG CTTGCAACAG CCGAAAGCAT TAAAAACAAA
TTCTTGGGAA TCGGTCCAAA ACAGCGGATG TTGATGGCGG TGATTGTAGA GCACAATCGG
CGGATGCACT CGCTAGTTGG CCAGGAATAC GCTATCGGAA CATTCAAACG GTACGAGGTT
TTGAGACGGC ACACCGAAAG CTTTTTGAAA GCAAATTTCA ATACAACCGA CTTCGATATT
AGTCGCATTG ATTTTGCCTT CATCGCCGAC TACGAGTTTC ATCTCCGTTC TGTCCGCAAA
ATGGGAAACA ATGCCGTGGT CAAACACATG AAGATGTTTC GCAAGATTGT GAATATCTGC
CTTGGAAATG GCTGGATGAG TCTTGACCCC TACTTAAATT TTAAGGGCAA GTTCAAAAAA
GTTGATAAGG CAATCCTCAC AAAAGAGGAA CTTTGCCTCC TTTCCGAGAA GGAGTTCGCG
AGTGATCGGC TCACCCAGGT TCGGGATACT TTCCTGTTCT GTTGCTACAC CGGACTCGCT
TACTCAGATA TTCAGAGCCT CGAGAGAAGC GATATCGCGC GAGGAATTGA TGGCGATCAA
TGGATTTTCA CGCATCGCAC CAAGACTAAC GTTAAGTCGC ACATCCCGCT TCTTCCCGAA
GCGCTGGCGA TAATAGCACG ATATAATGAT GATCCTGCTT GCGAGTCTCG CGGACTTGTA
CTGCCGGTAC CCAGCAATCA AAAAATGAAC GACTATCTTA AAGAGATCGC AGTCGTTTGT
GGTATCGATA AGATCCTGAC GTCGCATGTT GCCAGGCATA CATTCGCAAC TACAATAACT
TTGCAAAATG GTGTTCCGAT AGAAAGTGTC TCCAAGATGC TTGGACATAC GAACATTCGA
ACCACACAGA TATATGCGAA AATCTTGGAT TTGAAAGTGA GTGAAGATAT GCAAGCTTTG
AAAGGTAGAT TGGCTAGCAA GACCGGCGCA GGCCGGTAG
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| Protein sequence | MVMKTKLSLL FYLKKPRNYQ TGPMPIYLRI TVESKRSELA TGRECDPKTW NTGAGRVLGN
KEAVKSLNAY LGNLEQQFLD AHASLIRQGE LATAESIKNK FLGIGPKQRM LMAVIVEHNR
RMHSLVGQEY AIGTFKRYEV LRRHTESFLK ANFNTTDFDI SRIDFAFIAD YEFHLRSVRK
MGNNAVVKHM KMFRKIVNIC LGNGWMSLDP YLNFKGKFKK VDKAILTKEE LCLLSEKEFA
SDRLTQVRDT FLFCCYTGLA YSDIQSLERS DIARGIDGDQ WIFTHRTKTN VKSHIPLLPE
ALAIIARYND DPACESRGLV LPVPSNQKMN DYLKEIAVVC GIDKILTSHV ARHTFATTIT
LQNGVPIESV SKMLGHTNIR TTQIYAKILD LKVSEDMQAL KGRLASKTGA GR
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