Gene Dfer_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0874 
Symbol 
ID8224443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1036451 
End bp1037356 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content47% 
IMG OID644928740 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003085294 
Protein GI255034673 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA TTGCCTTCAC CATCGCATTC CTCTTCACTT TTATCCAAGG ACAATTCGCT 
TTTGCACAAA CACGCAAACC CGCATCGCTG GGAAGAGAAG AATATATTGA AGTAGAAAAA
AATGTAAAAC TGCACGTGAT CGACCTAGGC GAAGGCCAGC CCGTCGTGCT CATTCACGGA
TGGCCGCTCA ACAACGAGAT GTACGAATAT CAGTACCAGT ATCTGATTGA AAAGGGGTTC
AGGGTGATCG GCATTTCGCT CCGTGGTTTT GGTAAATCAG ACAGGCCCTA CGGTAAATAC
GATTTCGATA CATTCTCCGA CGACATCAAG GTTGTACTTG AAAAACTGAA AATCGAAAAT
GTCACACTGG GCGGATTTTC AATGGGCAGC GCGGTAACCC TGCACTACGT GACTAAATAC
AATGGTGCGC ATATCAAAAA CTTAGCCTTG TTCGGAGCAA CCGGCCCGTC GTGGAAACAA
CGCGAAGGCT ACCCTTACGG CATCACCGAC CAAGGCGCAG CCGATTTGAT CAAGCAGACA
AAAACAAACC GTGAGCAATT GGTAGCAGGC TTCGGAAAAG CATTTCAGGG CCAGGAAGGC
AGTCTTTCGC CGGAATCCAT CAAATGGCTG GAAAGCATTA ACCTCAATGC CTCTCCTTAT
GCCACCACCC AGTCGATCAG CGCTCTGCGT GACCTGGACC TTCGCCCTGT GCTTTCAAAA
ATCAAAATAC CTGTCGCAAT ATTCCATGGT ATCAACGACA AACTATGTGA CTTCTCCCAA
GCTGAACAGC TCAACAAAGC CATCAAAGGC TCCTACATTG TCAAGTTCGA GAAAGGCGGG
CATGCACTGT TTCTGGAAGA AATGGATAAA TTCAATGCTG AACTTGAGAA GTTTGCCAGA
AATTAA
 
Protein sequence
MKTIAFTIAF LFTFIQGQFA FAQTRKPASL GREEYIEVEK NVKLHVIDLG EGQPVVLIHG 
WPLNNEMYEY QYQYLIEKGF RVIGISLRGF GKSDRPYGKY DFDTFSDDIK VVLEKLKIEN
VTLGGFSMGS AVTLHYVTKY NGAHIKNLAL FGATGPSWKQ REGYPYGITD QGAADLIKQT
KTNREQLVAG FGKAFQGQEG SLSPESIKWL ESINLNASPY ATTQSISALR DLDLRPVLSK
IKIPVAIFHG INDKLCDFSQ AEQLNKAIKG SYIVKFEKGG HALFLEEMDK FNAELEKFAR
N