| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0615 |
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| Symbol | |
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| ID | 8224184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 701917 |
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| End bp | 705213 |
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| Gene Length | 3297 bp |
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| Protein Length | 1098 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928490 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003085044 |
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| Protein GI | 255034423 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGCCG CAATCTGTCT TTCCGGCCCG GATATATCCG CCCGGGCTGC CGGGCCGAAC
AACAGCCAGC TGCTCCCTGT GGCCGACAGG ATTAAAGGAA AAGTAACTTC CGCCGTCGAC
GGAGCGCCGA TCCCGGGCGT AAACGTGCTC GTGAAAGGCA CGCAGCTGGG TACCACCACC
GATGCCGACG GCGCTTACAC GCTCGACGTG GATTCCAAAA ACGCCGTGCT CGTATTTTCC
TACATCGGCT TCAATACCGC TGAAATGACG GTAGGCGGCA AAAGCGTTGT GGATGTAGTG
CTCGAAGAAA GCGTGGCAAC CTTGCAGGAA GCGGTTGTGA CCGCACTCGG TATCAAACGC
GAAACGCGTT CGCTGGGTTA TAATGTAGGC AAAGTGGAAG GCCGCGATGT GGCTAATGTC
GCGAACGAAA ACGTGCTTAC CTCCCTCTCC GGTCGCGTAT CGGGGGTTTC GATCAACCAA
ACGAGCGGCG TCGGCTCTTC CATCAGCATC GTGATCCGCG GTGCGGCTTC GCTGAAAAAC
AACCAGCCGC TGTTCGTCGT GGACGGTGTG CCGCTGGCCA ACAGCCTTGC CAACGTGAGC
GAAAAAGGAA GCGGCAACAA GGTCGATTAC GGTAATGCGA TTTCCGATAT CAACCCGGAC
GACATCGAAA GTATGTCGGT CCTGAAAGGC CCTTCGGCGG CTGCATTGTA CGGCTCGCGC
GCGGGTAATG GCGTGATCCT GATCACGACC AAGTCGGGCA AGAAAGGTAA AGGCCTCGGG
GTATCGTTCT CGACATCCAA TGTTTTCGAA AAGCCTTACC GCTACCTCGA TTTCCATTAC
AAATATGCGA ACGGCGAGCG TCCGTTCCAG CTCGATGAGG CCTCGGCTTA CTGGGGCGGT
CTGCCGCTCG ATGCAGGCAA CAAGGCCGTG CAATGGAACT CGCCCCTCGA TGCGAACGGG
CAGCCTGTTG AGACGGAGTT GAAGTCGTAT AAGAATAATA TGAAGAACTT CCTGCAAACG
GGGATCACTT CGACCAATAA CCTGACTGTC TCAGGCTCAA CCGACAAGGC TACTTACCGG
GTTTCGTATA ACAATATGAG TAACCGCGGT TTGATTCCCA ATTCGGACCT GTACCGCAAC
TCGCTTAGCT CGGCGCTGAC ATTCGATATG TCGAAAAACG TGAAACTGAG CACCAACATC
AACTTCGTTC GTTCGAACTC GAACAGCCGC CCGCAGACGT CGGAGCGCGA CGGTAACCCG
TTGCAGGCCG TTTACTACTC GCCGAGCTAC GATGTGCGTG ACCTGAAAGG CGTTTGGAAG
CCGGGCTTGG AAGAAATCGA GCAGCTCACC GTGGCGCCCG GCGAAACAGA TAACCCTTAT
TTTCTGGCCA AACACCTTAC CAACGCCTAC GTCCGCGACC GCCTGTACGG AAACCTGAAA
CTCGACTGGA CCATCGCACC AGGTCTGACG GCATTCATCC GCTATTCGCA TGATATGTAC
GATGAAGACC GCGAAACCAA AATTCCATGG AGCTACAAAA GCATGGCCAA AGGCGGTTAT
TACCTCGAAA ACGTAGGCCG CAACGAAGGT AACGCCGACT TCCTCGTGAC GAAAAGCATC
AAAGCAGGGG CATTCGATAT CAATATCTCC GGTGGTGGTA ACATCATGAG ACAAAAAGGC
AACAGCTCCA ACCTGGGCGG ACGTGACCTT TCGGTGCCGG GTTTGTACAA CATCTCCAAC
ATCCCCGTTG CCAACCGCGT AGTGGGCAAC GGCAGCTACA AAAAAGCGAT TTACAGCTTG
TACGCATTGG GTTCTTTTGG TTTCAAAAAT CAGCTTTACC TCGATGTGAC GGCCCGCAAC
GACTGGTCGA GTACCTTGCC GGAAGCGAAC CGCTCGTATT TCTATCCATC GGCGTCGCTG
AGCTGGCTGG CCAGTACTAC ATTCAATATG CCTACGAGTA TCTCCCTCCT GAAATTCCGC
GGAGGCTGGG CGCAGGTGGG TAACGACACC GACCCTTATC AGCTCTATCC CAACCTGGGA
ACCGGCAACT GGGGTAACCT CGTAACCGCC AACCTGGGCG AAACATTGCT TAACCCGACC
CTGCTTCCTG AAATCGCAAC TTCTACCGAA GGAGGTGTGG ATCTGAATAT GTTCAACAAC
CGCCTGCGTT TTGACCTGAC TTATTACGAC CGCACGAACA CCAACCAGAT TTTCAACGTG
CCCATGGCGC CTTCCACCGG GTATGCGAGC AAGAACATCA ATGCCGGTAA GCTCGTGAGC
CGCGGCTGGG AAATAGGGAT CGGGGGTACG CCTATCGACA ACCGCAACGG CTGGACGTTG
GATGTGAATG CGAATTTCAG CCGCAACCGT GTGACGGTGA AAGAGCTGGC CCCCAATTTC
CCTTATTTCG AACAATGGAG TGAAAACGGC GCGGGTGCCT ACACGTTTGT AGGCGAGCAG
ATCGGTAATA TTTACAGCCG CGGATTCGCC ACCGTAACCG ACCCGAATTC TCCTTACTAT
CGCTGGCCGA TTATCGCTTA CGATGGCGAA ACCGGTGATA TGGACTGGCA GCAGCTCGGT
GGCCGCGACA ATAACGTGAA GGTAGGTAAC TATAATCCCG ACTTCATGGT AGGTGGCCAG
GTGAACCTCT CTTACAAACG CTTCTCGCTC GGATTGAGCC TCGACTGGCG CCAGGGCGGT
GAGTTCATGT CGTTCACTTA CCGTTACGGC GAGTCGGACT GGAAATCGCA GCGCCAGCTG
GATAACCTGA TCCCGGGAAG CCTCTACTCG CCTGACGAGC TGGTGGCATT GCTGAAATCG
GACCCTGAAA AATACATTAT CCCTAAAAAC GGCAACTTCC CACGCGTAGG CGGCCACACG
GCGGCGACGG GCGGTTTCGG AGCCGATGGT GACGGTGCAT TCATCCCGGG CGTTTGGGAA
GATAAGGACG GAAACTACCA CGAATGGCTG GGCGGCCCTG GAACCAAGTA TCTGCCTATT
ACAGCTATGT ATCCTTGGAG TTACAACCAG CAGGTTACTT TCGATGCGTC GTTCGTGAAG
TTGCGCGAGA TCACATTGAC CTACAAAATT CCCGTGCTGT TCAACTCGGT GCGTAACGCG
AGCCTGTCGG TCTATACCCG TAACATCATG CTCTGGAACG CGGCGAAAAT CGGGATCGAT
CCTGAGCGTG CATTCTGGGC AGATCCGGGC AGAGGCGGTT TCCGCCAGGG TATCGAGCGT
CAGAACGTGA TGCCGTGGAC CATTCCATTC GGATTCAAGC TCAACTTCGA TTTCTGA
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| Protein sequence | MLAAICLSGP DISARAAGPN NSQLLPVADR IKGKVTSAVD GAPIPGVNVL VKGTQLGTTT
DADGAYTLDV DSKNAVLVFS YIGFNTAEMT VGGKSVVDVV LEESVATLQE AVVTALGIKR
ETRSLGYNVG KVEGRDVANV ANENVLTSLS GRVSGVSINQ TSGVGSSISI VIRGAASLKN
NQPLFVVDGV PLANSLANVS EKGSGNKVDY GNAISDINPD DIESMSVLKG PSAAALYGSR
AGNGVILITT KSGKKGKGLG VSFSTSNVFE KPYRYLDFHY KYANGERPFQ LDEASAYWGG
LPLDAGNKAV QWNSPLDANG QPVETELKSY KNNMKNFLQT GITSTNNLTV SGSTDKATYR
VSYNNMSNRG LIPNSDLYRN SLSSALTFDM SKNVKLSTNI NFVRSNSNSR PQTSERDGNP
LQAVYYSPSY DVRDLKGVWK PGLEEIEQLT VAPGETDNPY FLAKHLTNAY VRDRLYGNLK
LDWTIAPGLT AFIRYSHDMY DEDRETKIPW SYKSMAKGGY YLENVGRNEG NADFLVTKSI
KAGAFDINIS GGGNIMRQKG NSSNLGGRDL SVPGLYNISN IPVANRVVGN GSYKKAIYSL
YALGSFGFKN QLYLDVTARN DWSSTLPEAN RSYFYPSASL SWLASTTFNM PTSISLLKFR
GGWAQVGNDT DPYQLYPNLG TGNWGNLVTA NLGETLLNPT LLPEIATSTE GGVDLNMFNN
RLRFDLTYYD RTNTNQIFNV PMAPSTGYAS KNINAGKLVS RGWEIGIGGT PIDNRNGWTL
DVNANFSRNR VTVKELAPNF PYFEQWSENG AGAYTFVGEQ IGNIYSRGFA TVTDPNSPYY
RWPIIAYDGE TGDMDWQQLG GRDNNVKVGN YNPDFMVGGQ VNLSYKRFSL GLSLDWRQGG
EFMSFTYRYG ESDWKSQRQL DNLIPGSLYS PDELVALLKS DPEKYIIPKN GNFPRVGGHT
AATGGFGADG DGAFIPGVWE DKDGNYHEWL GGPGTKYLPI TAMYPWSYNQ QVTFDASFVK
LREITLTYKI PVLFNSVRNA SLSVYTRNIM LWNAAKIGID PERAFWADPG RGGFRQGIER
QNVMPWTIPF GFKLNFDF
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