Gene Dfer_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0136 
Symbol 
ID8223702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp149493 
End bp150656 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content50% 
IMG OID644928015 
Productprotein of unknown function UPF0118 
Protein accessionYP_003084572 
Protein GI255033951 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.291617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.459798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTGT TTTTTAAAAG TCGCAAACAC GAATCCGCCC CCGAACTGCC CGAATGGCTC 
ACCACGCGCG ACGGCTTCCC TTTCTACATC AAAGCCCCGA TGGTACTCAT CGGGCTTTAC
CTGTTTTTTC ACATCCTCGA TTCGTTGCAG GAAATCATCG TCCCGTTCGC ATTCGCCGGG
CTGATCGCCA TTCTCCTCAA TCCGATTTAC AACCGTTTTC AGCGATGGAA ATTCAACAAA
ATCGTAGCCA TCGTGCTCAC GATTTTCATC GCTATTCTGG TGGTGGGAGG CATCATGTTC
TTCCTGTCAT CGCAAATCGT GCAGTTCGGC GACATGGTCC CGCAGCTGGA AAAGAAGACG
ATGAAGCTGC TCGACAACTT GCAGGAATGG CTGTCGACGA CCTTCGGCAT TTCCACGGAA
AAGCAGATGA GCATGCTCGA CGAGGCGATC AACAACAGCC GCACGTACGT CGGCAAGACG
GTCAACACAC TTTTCGGCAT TATCAGTTTT TTTGTACTGA TCCCCCTCTA TATATTCCTG
CTGCTGTTTT ATAAGCCGTT GATTCTCAAT TTTATATTTG AGGTTTTTGA TGAAAATAAT
TCCGATCAGG TGGCGGAGAT TTTGCAGGAA ACCAAGGGCG CAGTGCAGAG CTATATTGTG
GGATTAATGA TCGAAACAAC CATCATTGCC GCATTGAATT CCGTTGCATT GCTCATACTC
GGCGTGCCTT ACGCGTTGCT GCTGGGCGTC ATCGGCGCAA TCCTCAACCT GATTCCCTAT
ATCGGCGGCA TTATCGCCAT TGCATTGCCG GTGCTCATTT CGTTCATCAC GAAGGACGGC
TATACCACAC CGTTACTCAT TATCGGGGCT TACACCGTCA TCCAGTTTTT GGATAACAAC
ATCATCGTGC CGCGAGTGGT ATCGTCCAAA GTTTCTGTGA ATGCGTTGAT TTCCATTCTT
GTAGTGCTGC TGGGCGGCAC GCTCTGGGGT GTGAGCGGCA TGTTTTTGTC CATCCCGTTC
GTAGCCGTGC TGAAAATCAT TTTCGATCGC ATCGACGAGC TGAAACCCTG GGGAAAGCTG
CTGGGCGATA CCATGCCCGA AGACGCGCCG GTGCAGGTCG TCAACCCGCG GGAAGCCGAC
GAAAACAAGC AGTCGTTGTT CTAA
 
Protein sequence
MGLFFKSRKH ESAPELPEWL TTRDGFPFYI KAPMVLIGLY LFFHILDSLQ EIIVPFAFAG 
LIAILLNPIY NRFQRWKFNK IVAIVLTIFI AILVVGGIMF FLSSQIVQFG DMVPQLEKKT
MKLLDNLQEW LSTTFGISTE KQMSMLDEAI NNSRTYVGKT VNTLFGIISF FVLIPLYIFL
LLFYKPLILN FIFEVFDENN SDQVAEILQE TKGAVQSYIV GLMIETTIIA ALNSVALLIL
GVPYALLLGV IGAILNLIPY IGGIIAIALP VLISFITKDG YTTPLLIIGA YTVIQFLDNN
IIVPRVVSSK VSVNALISIL VVLLGGTLWG VSGMFLSIPF VAVLKIIFDR IDELKPWGKL
LGDTMPEDAP VQVVNPREAD ENKQSLF