Gene DehaBAV1_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_1358 
Symbol 
ID5132150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand- 
Start bp1316874 
End bp1317545 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content48% 
IMG OID640530293 
ProductHhH-GPD family protein 
Protein accessionYP_001214813 
Protein GI147669995 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATAAAG AAAACTTAGC CCAAAATCTG GCTGATATAT ACCAGCGTCT TTTAAAGAAA 
TACGGCCCTC AGCACTGGTG GCCGGCCGAA AGCCGGTTTG AAATGATGGC GGGTGCAGTA 
CTTACCCAGA GTGCCGCTTG GACAAACGTT GAAAAGGCTA TTTCAAGGCT GAAAGAGGCT 
AATTTGCTCT CGGCAGAGGC TATATTGCAG GCCGCTGACA GCGCTCTGGC TGAATCTATC 
CGTCCCTCAG GCTACTTTAA TGTAAAAGTC CGCAAACTGA AAGCCCTGTC AAATTGGCTT 
CAGACTGGCT GCGGCGGACA AGCTGAAAAA CTGCTGGAGA TAGAGAGTAG TGTTCTTCGT 
GATGAATTGC TGAGTGTGTG GGGCATAGGT GAAGAAACAG CCGACTCCAT ACTTTTATAT 
GCCTGCGGAA AGCCCGTTTT TGTTATAGAT GCTTATACCC GAAGGATTTT CAGCCGTTTG 
GGTCTGACGG AAAAGGAAGC GGGTTATGAC CGTCTTCAAA GGCTTTTTAC GGCAAATCTG 
GCCGCTGATG CCGCCCTTTA TAACGAATAC CATGCCCTTA TAGTCAGGCA TGCCAAAGAG 
CATTGCAGGG TCAAACCCGG TTGTGAAGGG TGTGTACTGA AAGATGTTTG CCGTTTTGAC 
TATCGGGAAT AA
 
Protein sequence
MDKENLAQNL ADIYQRLLKK YGPQHWWPAE SRFEMMAGAV LTQSAAWTNV EKAISRLKEA 
NLLSAEAILQ AADSALAESI RPSGYFNVKV RKLKALSNWL QTGCGGQAEK LLEIESSVLR 
DELLSVWGIG EETADSILLY ACGKPVFVID AYTRRIFSRL GLTEKEAGYD RLQRLFTANL 
AADAALYNEY HALIVRHAKE HCRVKPGCEG CVLKDVCRFD YRE