| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0883 |
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| Symbol | rplA |
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| ID | 5131377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 871506 |
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| End bp | 872219 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529801 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001214343 |
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| Protein GI | 147669525 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.184517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAACAC ACGGTAAGAA ATATCAAGAC GCAATAAAAC TGCTTGACCA GAGTGCCGCT
TATGCTCCGG CTGAGGCTAT TGATTTGGCC AAGAAAATGA GTGCCGCCAA GTTTGATGAG
ACCGTTGAAA TGCATCTGAA GATGGGCCTT GATCCCAAAA ATGCTACCCA GCAGTTACGC
GGCGTGGCCG TATTGCCCCA TGGTTTGGGT AAAACTGTAC GGGTATTGGT GTTTGCTCAA
GGCGAAGCTG AAAAAGCTGC TCAGGTGGCT GGTGCTGATG TATACGGCGG TGATGAACTT
ATAAAGAAGA TAGAAGCCGG TTTCCTTGAT TTTGACGTTG CTATATCCAC CCCTGACATG
ATGAGCAAGG TTGGTAAGCT GGGTAAAGTT CTTGGTCGGC GCGGTCTTAT GCCTAACCCC
AAGAGCGGCA CCGTAGTACC GGCTGAAGAT TTCAAAAAAG TTATTGAAGA AGCCCGCAAG
GGGCGGGTGG AATTTAAGCT GGACCGTTCA GGCATTGTCC ATATTATATT GGGCAAGGCC
AGTTTCGAAG GGCAGATGCT TCTGGAGAAT ATGACTTCGG TAGTAGATGC TATTATCCGT
TCCAAGCCCA CTGGTGCCAA AGGGCAGTAT ATTAAGAGTG CTTATTTGGC AACTACAATG
GGACCTGGTG TAAGGCTTGA TCTTAGGGCT GTTTCCGCTA TGGGCGGCGT ATAA
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| Protein sequence | MVTHGKKYQD AIKLLDQSAA YAPAEAIDLA KKMSAAKFDE TVEMHLKMGL DPKNATQQLR
GVAVLPHGLG KTVRVLVFAQ GEAEKAAQVA GADVYGGDEL IKKIEAGFLD FDVAISTPDM
MSKVGKLGKV LGRRGLMPNP KSGTVVPAED FKKVIEEARK GRVEFKLDRS GIVHIILGKA
SFEGQMLLEN MTSVVDAIIR SKPTGAKGQY IKSAYLATTM GPGVRLDLRA VSAMGGV
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