Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0880 |
Symbol | |
ID | 5132420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 869694 |
End bp | 870338 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640529798 |
Product | hypothetical protein |
Protein accession | YP_001214340 |
Protein GI | 147669522 |
COG category | [S] Function unknown |
COG ID | [COG2928] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.677623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACCAT CAAATAACCC ACCATTAAAA ATACTGCGAA ACCGCTTTTT AACAGGGCTT GCCTTTGTCT TACCTATCGG AGCGGCTTTA GGACTGCTGA TTTGGGTATT TAATATTGTA GACGGTATGC TAAAACCAAT TATAGAGTTG TTCTTTAACT GGTATTTTCC GGGCGTGGGT CTTTTAGTAA CACTGCTCCT GATATACTTG GTAGGACTGG TATTAAGCAA CTATTTCGGT AAACAAATAT TGAGCTGGAT TGACAAACTA CTGGCCAAAG TACCCATTTT CAACCAGATA TATAACAGCG CCAAACAGGT TATACAGACA CTAGGTGTGG GCAATAAAGT CTCTTTTAAA GAGGCCGTGG TGGTAGAATT TCCCCGCGTG GGCATGCACA GTCTGGCATT TATCACAAAT GAAACCACCA ATTCCAGCGG TGAAAAACTG TATCTGGTGT ATGTGCCGGG CTCTCCCAAC CCAACCAGCG GTTTTTTAGA GCTGCTCCGG GAAAATCAGA TTGAGCGGGT AAATATTTCG GTTGAAGATG CCATGAAAAC TCTTATCTCC TGCGGCTTGG TATTTCCGGA AACTGTCCAA AGCATTGAGA TTGGACATGG GGATTCACAC CCCAACAAAC TCTAA
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Protein sequence | MSPSNNPPLK ILRNRFLTGL AFVLPIGAAL GLLIWVFNIV DGMLKPIIEL FFNWYFPGVG LLVTLLLIYL VGLVLSNYFG KQILSWIDKL LAKVPIFNQI YNSAKQVIQT LGVGNKVSFK EAVVVEFPRV GMHSLAFITN ETTNSSGEKL YLVYVPGSPN PTSGFLELLR ENQIERVNIS VEDAMKTLIS CGLVFPETVQ SIEIGHGDSH PNKL
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