| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0811 |
|---|
| Symbol | |
|---|
| ID | 5132093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 798119 |
|---|
| End bp | 799180 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640529728 |
|---|
| Product | NADH dehydrogenase (quinone) |
|---|
| Protein accession | YP_001214272 |
|---|
| Protein GI | 147669454 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACT TCTGGATCCA TCTTTTGGTT TACTTGGTCA TACTCTTTGG TTTTGTAATT
GTGAGTGTGC TTATATTTAT CTGGCTGGAA CGCCGCCTTA TCGGCCGTTT TCAGCTTCGC
CCCGGTCCCA ACAGAGCCGG CCCTTTCGGG CTGCTGCAGC CTATAGCTGA TGCGATCAAG
GTGCTTATCA AAGAAGACAT TATCCCCTCA GAGGCAGATA AAGGAGTCTT CTGGTTAGCT
CCTTTAGTGG CTTTCGTACC GGTAATGCTA ATGTTTGCCG CCATACCCTT TGCTGATGGA
GTTATGCTGG TTGACCTGAA TATAGGCATA CTTTATATAC TGGCAGTAAG TTCGGTAACC
GTGATCGGTA TATTTATGGC CGGTTGGAGC AGCAACAGCA AGTATTCCCT GCTGGGTGCC
ATGCGTACCA TTGCTCAGGA AGTCAGCTAT GAAATACCGC TAGTGCTTTC CATACTCGGT
GTTGTTATGT TAACCGGCTC GCTCTCTATG AATGAGATAG TAAAAGCTCA GGATGTTCCC
TTTATACTGC TGCAGCCGCT GGGCTTTTTT GTTTACCTGT CTGCTGCCAT GGCAGAAGTA
AACCGCACTC CTTTTGATTT ACTCGAAGCC GAGTCTGAAA TCATTGCCGG TTTTCACACC
GAATATTCCG GCATGAAATT CGGGCTTTTT TACCTTATGG AATACGCCGA GGTTCTGGCA
GTTTCCGCCA TCGCCACCAC CCTTTTTCTG GGAGGCTGGC AGGGGCCGCT GCTGCACCCG
GTTTTCTGGT TTATCGCCAA AGTTCTTCTG GTTTTCATGT TTATAATCTG GGTGCGTGCC
ACCCTACCTC GTCTGCGTAT AGACCAGGTA ATGGCTTTCG GCTGGAAATT CCTGTTGCCT
TTGTCTCTTG CCAATCTGGT TATTACTGCA TTTGAAATAC TGATTGCGCC GGATATAAAC
ACGGCTGTGC TTATAGGTAT AAATATAGCT GTAATGTTCG GGCTTATCCT CCTGTTCAGT
AGATTTTACA AGCTGGGAGG CGGACGTGTC AGTATTAAGT AA
|
|---|
| Protein sequence | MSDFWIHLLV YLVILFGFVI VSVLIFIWLE RRLIGRFQLR PGPNRAGPFG LLQPIADAIK
VLIKEDIIPS EADKGVFWLA PLVAFVPVML MFAAIPFADG VMLVDLNIGI LYILAVSSVT
VIGIFMAGWS SNSKYSLLGA MRTIAQEVSY EIPLVLSILG VVMLTGSLSM NEIVKAQDVP
FILLQPLGFF VYLSAAMAEV NRTPFDLLEA ESEIIAGFHT EYSGMKFGLF YLMEYAEVLA
VSAIATTLFL GGWQGPLLHP VFWFIAKVLL VFMFIIWVRA TLPRLRIDQV MAFGWKFLLP
LSLANLVITA FEILIAPDIN TAVLIGINIA VMFGLILLFS RFYKLGGGRV SIK
|
|---|
| |