Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0796 |
Symbol | |
ID | 5132386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 786957 |
End bp | 787628 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529713 |
Product | phosphoribosyltransferase |
Protein accession | YP_001214257 |
Protein GI | 147669439 |
COG category | [R] General function prediction only |
COG ID | [COG1926] Predicted phosphoribosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAAA TCGTATCACA AGACCATTCG GCTTTTACCG ACAGATACGA AGCCGGTGCT TTTCTGGCTA TCGAACTTGG CCAGTTGAAA GGCAAGCAGG CAGTTGTACT GGGTATACCC CGCGGCGGTG TAGTTATTGC CGCCCAGATA GCTGAACGCC TTCGTGATGC CAGACTGGAT ATCATACTCT CCCGAAAGCT TCGTGCCCCA TCAAGCCCTG AGTTGGCTGT AGGCTCTATA TCCGAAAATG GCCAGATATA CTTAAACCGC CATCTTATTC AGCAACTAGG CATTTCCTCT GACTATATAC AACAGGAGTC TGAATTTCAG TTTGATGAGC TTAAAAGACG GGCACGCGTC TACCGTGAAG TTATTCCCCG TATCCCCTTA AATAACCGCC TGGTTATCAT AGCAGATGAC GGCATAGCTA CCGGAGCTAC TTTTGAAGCG GCTCTGAATT CAGTCCGTCA AGAATGCCCT GCCTATCTTA TTGCCGCCCT GCCGGTAGGG CCTGAGAGTA CTCTGAAGCG GCTGGAGCAT TTGGCGGACG AAGTTATCTG CTTAAAATGT CCCGAGGAGT TTGAATCTGT GGGGCAGTAT TATTGCTACT TTACCCAGGT TGATGACGCT GATGTACTTA ATACATTAAA ACGCTTTCGC CATATCGTTT AG
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Protein sequence | MLKIVSQDHS AFTDRYEAGA FLAIELGQLK GKQAVVLGIP RGGVVIAAQI AERLRDARLD IILSRKLRAP SSPELAVGSI SENGQIYLNR HLIQQLGISS DYIQQESEFQ FDELKRRARV YREVIPRIPL NNRLVIIADD GIATGATFEA ALNSVRQECP AYLIAALPVG PESTLKRLEH LADEVICLKC PEEFESVGQY YCYFTQVDDA DVLNTLKRFR HIV
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