Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0267 |
Symbol | |
ID | 5131095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 275652 |
End bp | 278864 |
Gene Length | 3213 bp |
Protein Length | 1070 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640529168 |
Product | molybdopterin oxidoreductase Fe4S4 region |
Protein accession | YP_001213733 |
Protein GI | 147668915 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG AAAAACCAGA AAAGAACCCC TCAGGCGGCA TAACCCGGGC TAATTTTATA AAGGTTTCAG CTCTGCTGGG AGGAACTGCC CTGCTGTCCG GCTGCGACCT GGGTACAAAA CCCAGACGGA TACTGGGTAG CAGTGATTAC CCTTTATCCA AGGCTGAAGA TATTATCTAC AGTACCTGCC AGCAGTGTGC CACCCAATGC AGTATAAAGG TAAAACTGAT TGACGGCGTT ATTGCCAAAA TAGACGGAAA CCCGTTCAGT CCGTGGAATA TGATGCCCCA TCTGGACTAC AAAACCCCGG TAACAACATC TGCCTTCACT GATGCAAGTA TCTGCCCCAA AGGGCATTCG GGTGCCCAAA CATCATATGA CCCGTTCCGT CTGGTAAAAG TAATAAAACG TGACGGCCCC CGAGGCTCCA ACAAATGGAT AAGCATTCCC TTTGCCCAGG CAATAGATGA AATAGCCAAC GGAGGCAAAC TGTTTTCAAA CGTGCCCGGT GAAGAAAACC GGACAGTTGA AGGTTTAAAA GATATATGGG CACTGCGTTC CCCCGAAATA ACAAAAGCCA TCAAGAATGA TATAACCGCT ATCTGGGCTG AAAAAGACGC AACCAAAAAG TCAGCTCTGG TTGCAGTTTT CAAAGAGAAG CATAAAGATT ATCTGGATAA ATTTATAGAC CCCAACCACC CTGACCTGGG GACGAAGAAC AATGGCTTCT GCTTTATGTT CGGGCGGACA CAGGGTGGAC GGGTAGATTT CATCAAGCGT TTTACAAATG ACGCCATGGG CTCTGTAAAT GCTCACGGGC ATACCGCCGT CTGCCAGGGT AGCCTTTTTC AATCAGCCAA AGCCCTAAGT GCCCAGTTTG ATTCCGGCAC GGGGTCATTT TCAGAAGGCG AAAAGTTTTA CTGGATGGCC GACATAGGCA AGAGTGAATT TGTTATTTTT ACCGGAGCGT CCCCCTTTGA GGCCAGCTTT GGCCCGACCA GCCGCTCCAT GCGGATAAGT GAAGGCTTGG ATACAGGACG AATGAAATAT GCCGTAGTTG ACCCGCGTTT CTCCAAAGCC GCTTCCAAGG CATGGAAATG GCTTCCGGCC AAACCCGGTA CTGAAGGGGC ACTGGCACTG GCTTTAATCC GCTGGATATT TGATAACAGC CGCTATGACG CCAGATATCT GGCAAATGCC AACAAAGCCG CCGCTGATGC AGACGGAGAA CCTACCTGGA GCGGTTCCAG CTGGCTGGTG AAGATAGATG CCGCCGGCAG AGCTGCCAGA CTGCTAAGGG CTTCGGATAT CGGTTTGGAA CAGGGCAATT TCAGCTTTGA TACTCCGCTG GTTATGAAAC AGGGTCAGTT TACCCGGTTT GATCCCAACG ATAAAGTAAA TGCAGTTGAA GGTGAGCTTC TGGTAGATAC CACTGTAAAC GGTTTGCGGG TGAAAAGCAG CCTGCAAATA CTCCGTGACG AAGCTTCCAG CCATACGATA GAGGAATGGG CGGAAATCTG CGGAGTAAAG GCAGATGACC TTGCCGAAAT AGCCAGTGAA TTTACCAGCC ACGGCAAAAA AGCGGCGGCA GATATCCACC GGGGTGTTAG CCAGCATACC AACGGTTTTT ACAACTCCCT TGCCTGGTGG AACCTGAATA TGCTGATAGG CAACTATGAC TGGCAGGGCG GCATGCTAAA GGGCTCTGCC TATGATATCA AGGGCGGCAA AGCCGACGGG CCGTTCAATC TGGGACAAAT GAGACCCGGT GCGCTTACAC CCTCCGGAGT AAACATTGTC AGACACGGAA ATATCTACGA AGATACCACT CTTTACCAGA GCACAGGTTA CCCGGCTAAG CGAAACTGGT ATCCCCTTTC GGAAGATATT TATCAGGAGG TTATTCCTTC TGCCGGAGAT GCCTATCCCT ACCCTATCAA AGCCCTTTTC CTGCACATGG GTTCACCTGT TTACGTAGTC CCAGCCGGGC ATACTGCTCT GGAATTCCTG ACGGACCCGG AGAAACTGCC CCTACTGGTT GTTACCGACA TTGTCGTAAG TGAAACCTCC ATGTATGCAG ATTACATTTT CCCGGATCTG ACCAACATGG AACGCTGGGA ATTTGCCGGC AGCCAAAATA CTATTCCCTT CAAATCCCAG CCGGTCAGGC AACCCGCCAT TGCCCCTTTG GTGGAAACAG TAAAGGTTTT CGGTCAGGAT ATGCCCCTGT CCATGGAAAC CATGCTGCTG GGTCTGGCGG AAGAAATGGG TTTGCCGGGA TTCGGGCCTG ACGGGCTGGG ACAAGGTATA CCCCTTAGCC ACTTTGATGA CCTCTACCTG AGAATGGCTG CCAATCTGGC CTTCGGGGAA AAAGCTGACG GCTCTGATGC AGTACCTGAT GCAGACGAAG AAGAAATACG AATATTTACC CAAGCCAGAC GCCATATGCC GGATAGTATT TATAACCTTG AACGCTGGAG CAGTTTGGCA GGCGAAAACT GGCCAAAAGT TGTATACATG CTGAACCGGG GCGGCCGCTT CCAGGACTAT GAAGGGGGTT ATCCTGCCAA TCAACAGCTG GGCAACAAAT ATGGCCGCCT GTTCAATGTG TTTTTGGAAA AAACCACCGA AGTTAAAAAT TCGCAAACGG GTGAGTCCAT TCCCGGTCAT GCCTGCTACA TTACGGCTGG ACGTGACTGT TACGGACAGG AACTGAATGA CGAAAAGAAC GGATATGACC TGAGCTTAAT CACTTACAGA GAGATTGCAC GCACCCCCAC CACCGCCAGC AACTATTATC TGAACCCCCT GCTGCCGGAA AACACTATCC TTATTAACCA GCAGGATGCA GACAGGTTGG GGCTGACTGA GACAGATATA GTCAGGGTGG TTTCCGAGAG CAATCCGAAG GGTGTCTGGA ACCTGCGGAA TGGCCAGGAG TGGCCCATGA ACGCCAAGCT CAGCATTATG CAGGGTATCC GCCCCGGAGT GATAGCCTTT TCACTGGGGT ACGGCCACTT TGCCTACGGC GGACTGGATA TTACCATTGA CGGCCAGTTG ATTCCGGGCG AGGCAAAAAG AACCAAGGGT GTAAACGCCA ACGCCGCCAT GAGGGTAGAC CCGCACCTGA AAAATACCTG TCTGGTTGAT ACCGTTGGGG GCAGTGCCGT TTTTTACGAT ACCAAGGTCA GACTGGAAAA AGTTAATACC TAA
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Protein sequence | MNKEKPEKNP SGGITRANFI KVSALLGGTA LLSGCDLGTK PRRILGSSDY PLSKAEDIIY STCQQCATQC SIKVKLIDGV IAKIDGNPFS PWNMMPHLDY KTPVTTSAFT DASICPKGHS GAQTSYDPFR LVKVIKRDGP RGSNKWISIP FAQAIDEIAN GGKLFSNVPG EENRTVEGLK DIWALRSPEI TKAIKNDITA IWAEKDATKK SALVAVFKEK HKDYLDKFID PNHPDLGTKN NGFCFMFGRT QGGRVDFIKR FTNDAMGSVN AHGHTAVCQG SLFQSAKALS AQFDSGTGSF SEGEKFYWMA DIGKSEFVIF TGASPFEASF GPTSRSMRIS EGLDTGRMKY AVVDPRFSKA ASKAWKWLPA KPGTEGALAL ALIRWIFDNS RYDARYLANA NKAAADADGE PTWSGSSWLV KIDAAGRAAR LLRASDIGLE QGNFSFDTPL VMKQGQFTRF DPNDKVNAVE GELLVDTTVN GLRVKSSLQI LRDEASSHTI EEWAEICGVK ADDLAEIASE FTSHGKKAAA DIHRGVSQHT NGFYNSLAWW NLNMLIGNYD WQGGMLKGSA YDIKGGKADG PFNLGQMRPG ALTPSGVNIV RHGNIYEDTT LYQSTGYPAK RNWYPLSEDI YQEVIPSAGD AYPYPIKALF LHMGSPVYVV PAGHTALEFL TDPEKLPLLV VTDIVVSETS MYADYIFPDL TNMERWEFAG SQNTIPFKSQ PVRQPAIAPL VETVKVFGQD MPLSMETMLL GLAEEMGLPG FGPDGLGQGI PLSHFDDLYL RMAANLAFGE KADGSDAVPD ADEEEIRIFT QARRHMPDSI YNLERWSSLA GENWPKVVYM LNRGGRFQDY EGGYPANQQL GNKYGRLFNV FLEKTTEVKN SQTGESIPGH ACYITAGRDC YGQELNDEKN GYDLSLITYR EIARTPTTAS NYYLNPLLPE NTILINQQDA DRLGLTETDI VRVVSESNPK GVWNLRNGQE WPMNAKLSIM QGIRPGVIAF SLGYGHFAYG GLDITIDGQL IPGEAKRTKG VNANAAMRVD PHLKNTCLVD TVGGSAVFYD TKVRLEKVNT
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