| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0253 |
|---|
| Symbol | |
|---|
| ID | 5131977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 259346 |
|---|
| End bp | 260212 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640529154 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001213719 |
|---|
| Protein GI | 147668901 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAA TATCAATTTC AGTGGAAAAG CTTAGTTACT GGTATGGAGA CCTAAAAGCG
GTAAACCAGA TAAGCTTTGA GGTTGCCCAA GGTGAAATTC TGGGTTTTCT GGGTCCGAAC
GGGGCAGGCA AAACCACCAC CCAGAAAATG CTGACCGGAC AGCTCAGGCC AAAGGACGGC
CGGGCTACCC TGCTGGGATT TGATGTGGCT AAAGATACCG AAGAAATCCA CCGACGGATA
GGTATCTGTT TTGAACAGAC CAATCTGTAC GAACAAATGA ACGCTCTGGA AAACCTCCAG
CTTTTTGCTG ACCTTTTCGG GGTGAATAAT TTTAACGGTT ATGCCCTTTT AAAAAGAGTG
GGGCTGGCCG GACGGGAAAA AGACAAAGTA GCCGGTTACT CCAAGGGTAT GAAGCAACGC
CTTATGGTAG CCCGCTCACT GGTAAATACC CCCAGTATAC TCTTTATGGA CGAACCAACC
TCCGGGCTTG ACCCTGTATC TTCAGAGTCT ATCCGTGACA TCATACTGGA AGAACGCAAG
CGGGGGGCTA CCATATTTTT AACCACCCAT GACATGTGGG AAGCCGACAA GCTGTGTGAC
CGGGTAGCCT TTATCAACGA AGGCTCTATT GCCGCACTTG ATGCCCCGGT TAACTTAAAA
CAGCAGTACG GCAAACGCTC TCTTATAGCC AAAGTAAAAA GTGCAAACGG CCAGCTGGAA
AACAGGGAAA TAGCCTTGGA TACCGGCAAA ACAGCCGAGG AGGTTAGCAA ACTGCTCAGC
AGTGAGCGGG TGCTGACCCT GCACAGTGAA GAAGCCACTC TGGAGGATAT CTTTATAAAG
ATAACCGGAC GGAGGTTGAC TGAATGA
|
|---|
| Protein sequence | MSQISISVEK LSYWYGDLKA VNQISFEVAQ GEILGFLGPN GAGKTTTQKM LTGQLRPKDG
RATLLGFDVA KDTEEIHRRI GICFEQTNLY EQMNALENLQ LFADLFGVNN FNGYALLKRV
GLAGREKDKV AGYSKGMKQR LMVARSLVNT PSILFMDEPT SGLDPVSSES IRDIILEERK
RGATIFLTTH DMWEADKLCD RVAFINEGSI AALDAPVNLK QQYGKRSLIA KVKSANGQLE
NREIALDTGK TAEEVSKLLS SERVLTLHSE EATLEDIFIK ITGRRLTE
|
|---|
| |