| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_2226 |
|---|
| Symbol | |
|---|
| ID | 7285942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | - |
|---|
| Start bp | 2683585 |
|---|
| End bp | 2684775 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643583048 |
|---|
| Product | sugar efflux transporter |
|---|
| Protein accession | YP_002480800 |
|---|
| Protein GI | 220905488 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA TAAAAACTCC GGAGGGAAGG CGCCTCTGGG TTCCTGTTTT CACGCTTGCC
CTGGCTGCTT TCATTTTTGT TACCACCGAG ATACTGCCCA TCGGGCTGTT GCCGGAAATT
GCCGCGGACC TCGGCGAAAC AGAGGCCTTC ACCGGGCTTC TTGTGGCTGT ATATGCCTGG
GTTGTGGCCT TGCTGTCGCT GCCCCTGACT GCTCTGACGG CCCGTTTTGA ACGGCGCAAA
CTGCTGCTCT GCCTGTTTGG CGTATTCATT GCGGGCCATG TGCTTTCGGC TTTTGCGTTC
AATTTTACCA CCCTCATGAT TGCCCGCATA TGCGTGGCAA ACGCTCACGC CGTATTCTGG
TCAATCGCAA GCCCCATCGT GGTGCGCGTA ACGCCGCCGG CACTCAAGGC CAAGGGGCTT
GCCATCATTA TTGTAGGCGG TTCGCTGGCG ACGGTGCTGG GGGTTCCGTT CAGCACGGTC
ATCGGCCAGC ATTTCGGCTG GCGGGCAGCG TTTTTGATCA TCGGGGCTAT GGCCTTCTGC
ATTGCGCTGA TTTTGTGGCG ACTGCTGCCG ACGCTTGAAT CCAAGGATAC GGGATCGTTC
AAAAGCGTCC CTGCCCTGTT TCGCAACAAG GAGCTTTCAC TGCTCTATTT GCAGACCATG
CTGGCTGTGA CTGGGCATTT TGTGGCCTAT ACCTATCTGG CGCCCCTGCT CATCCAGGTG
GGCGGCTTTA CGGAAGGGGC CGTGCCGCTG TTCTTGTTGA TTATGGGCCT GTCGGGCATT
GCGGGCAGCA TGCTTGCCGC GCGGCTGGTG GGCAACGGGG CAAAATTCGT CTTTACTGTG
CCGCCTGTGG CAATTTTTCT TTGCCTGCTG GTGCTGAACG TTTCCATTGA CAGCATCCTG
CTTATCGTGC CGCTATGCAT TGTATGGGGA GGCAGCATGG CGGTGCTGGG CCTGCTGTTT
CAGAGCAGGA TACTTGAAAT CGCGGCGCAC TCCGCCGATA TCGCCACATC AATATATTCG
GGTATTTTCA ACGTGGGCAT CGGCGGCGGT GCGTTTATCG GCAGTATGGT GTTCAACAAG
CTTGGGCTGG GCATGACGGG ATACGCGGGC GCGGCGTTCT TTTTCGCGAC CATTCTGGTC
AGCCTGTATG CTGCGCGGAT CGGGCGCAGC GAAGGTCCGG CCGCAGGCTA A
|
|---|
| Protein sequence | MTTIKTPEGR RLWVPVFTLA LAAFIFVTTE ILPIGLLPEI AADLGETEAF TGLLVAVYAW
VVALLSLPLT ALTARFERRK LLLCLFGVFI AGHVLSAFAF NFTTLMIARI CVANAHAVFW
SIASPIVVRV TPPALKAKGL AIIIVGGSLA TVLGVPFSTV IGQHFGWRAA FLIIGAMAFC
IALILWRLLP TLESKDTGSF KSVPALFRNK ELSLLYLQTM LAVTGHFVAY TYLAPLLIQV
GGFTEGAVPL FLLIMGLSGI AGSMLAARLV GNGAKFVFTV PPVAIFLCLL VLNVSIDSIL
LIVPLCIVWG GSMAVLGLLF QSRILEIAAH SADIATSIYS GIFNVGIGGG AFIGSMVFNK
LGLGMTGYAG AAFFFATILV SLYAARIGRS EGPAAG
|
|---|
| |