Gene Ddes_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1938 
Symbol 
ID7285654 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2334710 
End bp2335823 
Gene Length1114 bp 
Protein Length370 aa 
Translation table11 
GC content59% 
IMG OID643582760 
Producthypothetical protein 
Protein accessionYP_002480512 
Protein GI220905200 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.374727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCAAC TCACCGACCT TCGCGCCGCC TGCCCTCCTC TTGCCCAACG TTTTGCCTCC 
CTCTGGGGGC GTCTTTGACG TGGCGGCCAG CGAAAAACGG TTGCAGGCCA TTGAAACAGA
AATTTCACGT CCCGGCGCAT GGGACAAACC CGAAGCGCTC ACGCCCCTGC TTCAGGAAAA
ACGCCGCCTC GAAGATGAGG TGGCCCGCCT GAACAAGCTC AAAACCTGCC ACGACGATAT
GAACGAGTGG CTGGCTCTGG CAGCGGAAAG TGAAGATCCT GAAGCGCTGG AATCCCTGGC
GCAGCAGCAG AAGGATCTGG CCGCCCTGCT GGACGAAACA GAACTTGTGA TGCTGCTTTC
CGCAGAAGAA GACAGCCAGG ACGCCATACT TGAAATCCAT CCCGGCGCGG GCGGCACAGA
GTCTCAGGAC TGGGCAGAAA TGCTGCTGCG CATGTATACC CGCTGGGCTG CCGATCATGA
CTACAAGGTT GAAGAGCTTG ACTTTCTGCC CGGCGACGAG GCCGGCGTGA AAAGCGTTAC
CCTGCGCGTG GGCGGGCCGC ATGCTTTCGG CTTTCTCAAG AGCGAGCGCG GCATCCACCG
CCTCATCCGC ATTTCGCCCT TCGACTCCTC CGGCCGCAGG CATACATCTT TTGCTTCGGT
GGATGTTATC CCCGACGCTG GTGACGATAT TGAACTGGAC CTCAAGGAAG CCGACCTGCG
AGTGGATATT TTCCGCTCCA GCGGTCCCGG AGGCCAGAGT GTCAACACCA CAAGCTCTGC
CGTGCGCATA ACCCATATTC CCTCGGGCAT ATCCGCCCAG TGCCAGAACG AAAAATCGCA
GCACCACAAC AAGGAAACTG CCTTGCGCGT CCTGCGCGCC CGCCTCTACA ACATGGAACT
TGAAAAACGC GAAGCCGCGC GCCAGGCCCA GTACGCCGGC AAGGACGCCA TTGCTTTCGG
CAGCCAGATA CGCACCTACA CCCTTCAGCC CTATCGCCTG GTCAAGGATC ACCGCACAGG
TACAGAGGTC GGAGATGTAG ATGCGGTTCT GGACGGGCAG ATTGACGCCT TCCAGCACGA
CTACCTTTTG CACCGCCATG AGCAGCAACG CTGA
 
Protein sequence
MLQLTDLRAA CPPLAQRFAS LWGRLDVAAS EKRLQAIETE ISRPGAWDKP EALTPLLQEK 
RRLEDEVARL NKLKTCHDDM NEWLALAAES EDPEALESLA QQQKDLAALL DETELVMLLS
AEEDSQDAIL EIHPGAGGTE SQDWAEMLLR MYTRWAADHD YKVEELDFLP GDEAGVKSVT
LRVGGPHAFG FLKSERGIHR LIRISPFDSS GRRHTSFASV DVIPDAGDDI ELDLKEADLR
VDIFRSSGPG GQSVNTTSSA VRITHIPSGI SAQCQNEKSQ HHNKETALRV LRARLYNMEL
EKREAARQAQ YAGKDAIAFG SQIRTYTLQP YRLVKDHRTG TEVGDVDAVL DGQIDAFQHD
YLLHRHEQQR