Gene Ddes_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1870 
Symbol 
ID7285585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2253559 
End bp2254821 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content62% 
IMG OID643582691 
Productdihydroorotase, multifunctional complex type 
Protein accessionYP_002480444 
Protein GI220905132 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTTT GCATCAAAAA TGCCCGCCAC CTGGAAGCCC CGGTGGACCT TCTGGTGACC 
GGCGGAAAAA TTACGACCAT GACCCCTGCG GGGCATCACA CGCCCCCCGA AGGCTGCGAG
ATTTTTGACG CGCGCGGCCT TGTGCTCATG CCGAGCCTTA TCGACGCCCA CGTACACCTG
CGCGAACCCG GCTTTGAGTA TAAGGAAGAC GTGGCCTCGG GCCTTGAGGC TGCCGCGCGC
GGCGGTTTTG GCGGTGTCAT GTGCATGGCC AATACAAAGC CCGTCAACGA TACGGCAAGC
GTTACCCGCC ACATGCTGGA CAAGGCCCGC CGGAGCCATC CGCACGGCCC GCGCCTGTTC
CCTGTGGCCG CCGCCACCGT GGGTCTCAAG GGAGAAATGA TGGCTCCCCT GGCCGAACTC
AAGGAGGCCG GCTGCGTAGC TGTTTCCAAT GACGGCCGCC CGCTGGAAAA TGCCGAGCTT
GTGCGCCGTA TCATGGAATA TGGGGCGGAT CTGGGGCTTG TACTCATTGA CCATTGTGAA
GACCCGCACC TGGCCCGTGG CTGGATCATG CACGAAGGGC ATACCAGCGG CCTGCTGGGC
CTCAAGGGGC AGCCCGCCGC CGGTGAGGCC GTACAGGCCG CCCGCGACAT CATGCTTGCA
GAGTATCTTG ATATTCCGGT GCATATTGCG CATGTTTCGG CGGAACTGAC GGTGGACATC
ATCCGCTGGG CCAAGGCGCG CGGCGTCAAG GTCAGCGCAG AAACCTGCCC GCATTACCTG
CTGCTGGACG AGCACGCACT TGAGAACTAC AGTACCCAGG CCAAGGTCAG TCCGCCCCTG
CGCACGGCGC GCGACCGCGA TGCCCTGCGT GACGCTGTGA AAACGGGTGT TGTGGATATT
CTTGTTACCG ACCATGCGCC CCATGCGGCC CATGAAAAGG ACGGTACCCT GGACGAAGCA
CCCTGCGGTT TTACCGGCCT TGATCTGGCC CTGAGCCTTA CCTGGGGGCT TGTGTGCGAA
GGCGTGTTGG CCGAGGCCGA TGCGCACCGC CTGTGGTGCC GCCGCCCGGG TGAAATTTTC
GCTTTGCCGT GGAACGGGTT TATCCCCGGC GACCCGGCAG ACTTCTTTTT GTTTGACCCG
GACGAAACAT GGGTTGCCTC ACGGGAAACC ATGTATTCCA AAAGCCTGAA CACGCCCTTT
CTGGGGCAGA CACTGCGCGG GCGCGTCAAG CATCACTGGA TGGAGGGCAA ACAGCTCTTC
TGA
 
Protein sequence
MRLCIKNARH LEAPVDLLVT GGKITTMTPA GHHTPPEGCE IFDARGLVLM PSLIDAHVHL 
REPGFEYKED VASGLEAAAR GGFGGVMCMA NTKPVNDTAS VTRHMLDKAR RSHPHGPRLF
PVAAATVGLK GEMMAPLAEL KEAGCVAVSN DGRPLENAEL VRRIMEYGAD LGLVLIDHCE
DPHLARGWIM HEGHTSGLLG LKGQPAAGEA VQAARDIMLA EYLDIPVHIA HVSAELTVDI
IRWAKARGVK VSAETCPHYL LLDEHALENY STQAKVSPPL RTARDRDALR DAVKTGVVDI
LVTDHAPHAA HEKDGTLDEA PCGFTGLDLA LSLTWGLVCE GVLAEADAHR LWCRRPGEIF
ALPWNGFIPG DPADFFLFDP DETWVASRET MYSKSLNTPF LGQTLRGRVK HHWMEGKQLF