| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ddes_0869 |
|---|
| Symbol | |
|---|
| ID | 7284545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011883 |
|---|
| Strand | + |
|---|
| Start bp | 1018661 |
|---|
| End bp | 1019911 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643581665 |
|---|
| Product | Membrane-bound lytic murein transglycosylase B-like protein |
|---|
| Protein accession | YP_002479454 |
|---|
| Protein GI | 220904142 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.627939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATAA CGCTGGCCGG AAAAGCTTCT TTAGCCACGT TCAGAACGGT CAGCCTGATA
TGCTGTCTGG TCTGCGGCAT GCTCGTGGCC GCCTGCGGCG GCGCGCATAC CCAGCCGGTT
TCAGAACCTG AAAGCGCCGG TCCGGCCCAT GGGGTCGTTC CGGGCAAGGT TGCCGGCCAC
GATTTGCCCG CAACGGGCGA AGCGGTAACT GGCCGGAGCG GCGGGGGAGA CCTCTCCCCC
GTTCGTCCCG GCCTCCAGGC GCAGCCGGAA CTACCCGGTA ACGAAAATGT CTCGGAGGCG
GGTACGTCTG CCATGGCCCC GGTCTGGCTG CCGCTGGCCA TGCGGCTTGC CGCCGATGGG
CTTTCCGGAC CGCGGGTAGA TGCCCTGCTG GGTACGCTGG CCTCTACGCC CAGTCAGTCA
CCTATGGGCC GCAAAATGCT TGAGCTTTAC AAAAGCCGTT TCATGCCCCG GCCTCCTTCC
GCCAAGCCCA CGTCCACAAC CTACTACAAA GGGGTCGTAA CGGAACAGAA TGCCCGCTTG
TGCCGCGCGT TCATTGCCGA GCATAAACAG GCGTTCAGTC AGGCCCAGGC CCGCTACGGA
GTCCCTTCGT CCGTGGCAGT GTCTCTGCTT TTTGTGGAAA CGCGCCTTGG CAAGGTGCTG
GCTGATGTGC CGGAAAACGC CCTTTACACC CTGGCTAGTA TGGCCGTGAG CCGTGATCCT
TCGCAAATCG ATCAATGGCT GCCGCGTATG CCGGGCTATG AAGAACACAT GGACTGGCTG
CAGGAAACCA TGCCGAAACG TGCCGACTGG GCCTATAAAG AAGTACGGGC TCTTGTGCGC
CATATCCTGC AGGATGATCT TGATCCCCAG TACCTGCCCA GCTCCATTTA TGGGGCGGTC
GGCCTGTGTC AGTTCATGCC CTCCAATATC GCGGCGTATG GAGCGGACGG TGACGATGAC
GGCAAGGTTG ACCTGTTTCA TGTGCCGGAT GCTGTGGCAA GCCTGTCCAA CTATCTGGTA
CGGCATGGCT GGAAGCCCGG CATAAGCCGC GCGCAGCAGC ACAAGGTGCT CATGACCTAT
AACCGGTCCA CGGTCTATGC CAATACCATT CTTGCCCTGG CCGATCTCGT GCAAAAGTCC
GAAGCTGCGG CAGGCAAGGC CGCTGCACGG GGGCGGCCGG AAAAAAGCGC TGCTTCCGGC
AAAGGCGGCA AGGCCCGCCC TTCCGGTGTG AACGCCGGGC AGGGGTCTTG A
|
|---|
| Protein sequence | MTITLAGKAS LATFRTVSLI CCLVCGMLVA ACGGAHTQPV SEPESAGPAH GVVPGKVAGH
DLPATGEAVT GRSGGGDLSP VRPGLQAQPE LPGNENVSEA GTSAMAPVWL PLAMRLAADG
LSGPRVDALL GTLASTPSQS PMGRKMLELY KSRFMPRPPS AKPTSTTYYK GVVTEQNARL
CRAFIAEHKQ AFSQAQARYG VPSSVAVSLL FVETRLGKVL ADVPENALYT LASMAVSRDP
SQIDQWLPRM PGYEEHMDWL QETMPKRADW AYKEVRALVR HILQDDLDPQ YLPSSIYGAV
GLCQFMPSNI AAYGADGDDD GKVDLFHVPD AVASLSNYLV RHGWKPGISR AQQHKVLMTY
NRSTVYANTI LALADLVQKS EAAAGKAAAR GRPEKSAASG KGGKARPSGV NAGQGS
|
|---|
| |