| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_3320 |
|---|
| Symbol | |
|---|
| ID | 3758297 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 3306545 |
|---|
| End bp | 3307450 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637784233 |
|---|
| Product | cell wall biosynthesis glycosyltransferase-like protein |
|---|
| Protein accession | YP_389809 |
|---|
| Protein GI | 78358360 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA TAACCATTAT TATTCCTTCA TATAACGATG CTTCCGGCTT ACGCCAGTCC
TTGCCGCCGC TTATCAACAA AGCCAAAGAA AACGCATGGG AAATCATCGT TGTCAACGAC
TGCTCGACTG ACGATACTGT GGCAGCCCTG CAGGAATTCG ACTCCGCGGT CACCGTCATC
ACCAACGAGG TGAACATGGG ATACGGCGCG TCCATCAAGC GTGGTATTCT GGCGGCAAAG
ACCGAGTGGG TTGCCTCCAT GGATGCTGAC GGACAGCACC GCATTGCAGA TCTGGAAGCC
ATGGCGGCCA GGCTGAAAGA CGACGACGTG GACGCGCTCA TCGGCAAGCG AGACAAAAGT
TCTCATGTGC CTTTTGTCAG AATGCCCGGC AAATGGGTAC TGGCGCACGC TGCAAACTTC
ATCACAGGCA GAAAAATTCC GGATATCAAC TGCGGCCTGC GCATACTCCG CCGCAGATTC
ATGCTCAGCC TGCTGTCGCT TACATCCGAC GGTTTTTCGT TTTCCACAAG CACTCTTGTC
TGTCTGCTGC AGTTGGGCTG CCGTGTGCAG TTCGTTCCTG TAACAGTTGA TGAGCGCATC
GGAAAAAGCA CCGTGAAGCA GGTCAGAGAC GATTTTTACA CGCTCATGCT CATCCTGCGG
CTGATCACTC TTTTCAAACC GTTGCGTGTA TTTCTGCCGC TCAGCCTTAT ACTGTTCGCT
GCCACGTTCA TCAACCAGAT GTACGTTTTT GCCACACAAG GGCTGGATAT AACCACCGCC
ACAGTGGTGG GCGGTCTGGG CGGTCTGTTC ATTTTCTGCA TGGCCCTGCT CGCGGATCAG
ATTTCAGGGC TGCGCAGAGA CCTGCTGCTG CGTGACATAA AAATGGAGCA GCTTTCCTGC
AAATAG
|
|---|
| Protein sequence | MSNITIIIPS YNDASGLRQS LPPLINKAKE NAWEIIVVND CSTDDTVAAL QEFDSAVTVI
TNEVNMGYGA SIKRGILAAK TEWVASMDAD GQHRIADLEA MAARLKDDDV DALIGKRDKS
SHVPFVRMPG KWVLAHAANF ITGRKIPDIN CGLRILRRRF MLSLLSLTSD GFSFSTSTLV
CLLQLGCRVQ FVPVTVDERI GKSTVKQVRD DFYTLMLILR LITLFKPLRV FLPLSLILFA
ATFINQMYVF ATQGLDITTA TVVGGLGGLF IFCMALLADQ ISGLRRDLLL RDIKMEQLSC
K
|
|---|
| |