Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dde_1602 |
Symbol | |
ID | 3755029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
Kingdom | Bacteria |
Replicon accession | NC_007519 |
Strand | - |
Start bp | 1633341 |
End bp | 1635095 |
Gene Length | 1755 bp |
Protein Length | 584 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637782481 |
Product | ATPase |
Protein accession | YP_388094 |
Protein GI | 78356645 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.504525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATGT ACAAGAAAGT AATTGTCATG ACACGCGGCA ATCATTTTCT GCTAGGATTC GCCGCATTTT TTGCAATTCT GGATGTCCTG TTCGAGCTCA TTCCATACTT TGCAGTCTAC AGCCTTGTCA TTCATACCAC AGAAGGAACA CTTACGGAAC ATGCCGTCGC TGTCCATAGC GGCATTGTGC TTTGTGCAAT AATACTGCGG ACGTTATCGA GATGGGCAAG TGCAGTGTCG GCGCACAAGG CCGGATACAG GACACTGTAT AACATACGCA TCAGGCTTGC GGACCATATC GGCAAACTTC CCGGCATGTA TTTCACCCGG CAGTCCACAG GCAACCTGCA CAAAATAATG ACTGAAGATG TCGAAAGAAT AGAAAATCTT CTGTGCCATC ACCTGCCGGA CCTGTTTGCA TCCATTGCAG CTCCGCTTTT TACCCTTGCC GTATTTTTTG CCGTCGACTG GCGGCTGGCC CTTTTTGCAC TGTGCCCGCT GCTGCTGGCA GTCTTATGCC AGCGGATACT TGCCAAAGAA GCCGCAAAAC ACATGCACAC CTATCATGCA GCCATGGGAG CAATGACAGA CAGCATCATG GAGTACACAC GCGGTATAAC TCTTATCAAA TCTTTCAACC GCACTGCACG CACATTTACA CGCTTTACAG ACAGCGTACA CGCTGTACGC GATGTTATGA TCACATGGAA CAAGAACGCC AGCACGTTTT ATGCACTGTT CGGCACATCG CTCATAAGCG GTATTGTTTT TGTTCTGCCT CCGGGAATAT GGCTCTACTC CGGCCATGGA CTGACTTTTG AGTCACTGTT CCTCTTTTTG CTACTTGTTT CCGGCTATGC GCTGCCTCTG GACAGGTTAA GCCGCTTTGC CAGCAAATTG CGGCAGATAG AAGAAGGCGT CGGCAAAATT GATGAAGTGT TATCAACACC GCCGCTTCCT CCTTCGCGTA CCAACCTGAG CCCGCGCAGC GGTGACATAC AGTTCAGCAA AGTCACCTTC GGCTACACAC CTGATGCGCC TTTTTTCCAG AATATTTCAT TTACCATCCC CTACGGCAGA CTCACAGCGC TGGTCGGCCC GTCAGGAGCA GGCAAAACAA CGGCAGCGCA GCTTATTGCC CGCATGCAGG ACGTATGGAG CGGTTCCATT TCGCTGGGGG GGGATGACTT GCGCGACCTG AATCAGGAGC AGCTGTTCGA ACACATCGCT TTTGTATTTC AGGATACGTT CCTACTGAGC GACTCGGCCA TGGCCAATAT CCGCGCCGCG CGCCCTGATG CATCAGACGC TGAAGTAATA CACGCTGCGA CCATGGCAAA AGCACATGAG TTTATTGCAT CGTTGCCGCA GGGCTATGCA ACACCTCTAG GTGACGGCGG TGTACCGTTG AGCGGCGGAG AAAGACAAAG AATAGCCATC GCCCGTGCGT TCCTCAAAGA TGCTCCCATT GTAATTCTGG ATGAAGCCAC AGCGTACACA GACCCGGAAA ATGAAGTTGC CATCCAGCAG GCGTTAAGCA CTCTTCTGGC CCGCAAAACC GTAATTGTCA TTGCACACCG GTTAAGCACC ATCACTGAAG CAGACAAAAT CATTGTTTTT GATAACGGCA GCGTAGCGGA AACCGGCAAA CACGATTCGC TGGTTGCTAA CGGCGGAGTA TATTCCCGCC TCTGGGCTGC GCAGCAGGCA AGCGACCAAT GGGGGTTCAA CATGCCGGAG GAACAGCATG CATAA
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Protein sequence | MQMYKKVIVM TRGNHFLLGF AAFFAILDVL FELIPYFAVY SLVIHTTEGT LTEHAVAVHS GIVLCAIILR TLSRWASAVS AHKAGYRTLY NIRIRLADHI GKLPGMYFTR QSTGNLHKIM TEDVERIENL LCHHLPDLFA SIAAPLFTLA VFFAVDWRLA LFALCPLLLA VLCQRILAKE AAKHMHTYHA AMGAMTDSIM EYTRGITLIK SFNRTARTFT RFTDSVHAVR DVMITWNKNA STFYALFGTS LISGIVFVLP PGIWLYSGHG LTFESLFLFL LLVSGYALPL DRLSRFASKL RQIEEGVGKI DEVLSTPPLP PSRTNLSPRS GDIQFSKVTF GYTPDAPFFQ NISFTIPYGR LTALVGPSGA GKTTAAQLIA RMQDVWSGSI SLGGDDLRDL NQEQLFEHIA FVFQDTFLLS DSAMANIRAA RPDASDAEVI HAATMAKAHE FIASLPQGYA TPLGDGGVPL SGGERQRIAI ARAFLKDAPI VILDEATAYT DPENEVAIQQ ALSTLLARKT VIVIAHRLST ITEADKIIVF DNGSVAETGK HDSLVANGGV YSRLWAAQQA SDQWGFNMPE EQHA
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