| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_1049 |
|---|
| Symbol | |
|---|
| ID | 3755474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | - |
|---|
| Start bp | 1077478 |
|---|
| End bp | 1077933 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637781918 |
|---|
| Product | phenylacetic acid degradation-related protein |
|---|
| Protein accession | YP_387545 |
|---|
| Protein GI | 78356096 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0000760712 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAA TACACAAAGA TCTTCTCACG TTTGTGGAAC AGTCCATCCC GTTTCACAAA
CTTCTCGGAA TACGTGTGGA ACATGCCGTA CCCGGCTTTG CCAGAGTACG GCTGCCGTAT
CAGGACGCCT TTTGCGGCAA CATGGCACGC GGCGCGCTGC ACGGCGGCGT GACGGCGGTA
CTGGTGGATA TATGCGGTGC CGTGGCGCTG TGGACGCATT TCGGCCCGCT GGATAAAACA
GCCACCATTG ACATGCGTGT GGACTATCAG CGACCGGCAC CTTTTGACGA CCTGCTGGCC
GAAGGTGAAG TGCGCGTGAT GGGCAACCGC ATAGCCAGCG TGCATGTACG CGTTACAGCA
GCCGCTGCCC CTGATCAGCT TATTGCGGAG GGAAGATGCG TCTACTACGT CAAACGGGTA
CCGCAGCAGC CGGAGACCGC CGGAACACAG GAATGA
|
|---|
| Protein sequence | MQEIHKDLLT FVEQSIPFHK LLGIRVEHAV PGFARVRLPY QDAFCGNMAR GALHGGVTAV
LVDICGAVAL WTHFGPLDKT ATIDMRVDYQ RPAPFDDLLA EGEVRVMGNR IASVHVRVTA
AAAPDQLIAE GRCVYYVKRV PQQPETAGTQ E
|
|---|
| |