| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0531 |
|---|
| Symbol | |
|---|
| ID | 3756515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007519 |
|---|
| Strand | + |
|---|
| Start bp | 537415 |
|---|
| End bp | 538527 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637781391 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_387027 |
|---|
| Protein GI | 78355578 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.863608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCATAA GGGGATGCCG TTCCGCGGCC GTGCTGGCTG CTGCGGCGTT GTTGTGGATG
CTGGCCGCTG CGGGGCATGC TGAAACTGTA AAAACCCCTC CCCGGCTGCT GGAAGGAATG
GCTTCGTGGT ACGGCGAATT TTTTCAGGGC CGTCCCACAG CCAGCGGCGA ACCCTTTGAC
ATGAATGCGC TTACTGCGGC GCATATGACT CTGCCGCTGG GCAGCATCGT GCGGGTGGTC
AATCTGGAAA ACGGAAAAAC CGTCATCGTG CGTATCAATG ACCGTGGACC GTTTAAAAAG
CAGTATGTCA TTGACCTGTC CCGTCAGGCC GCCGTGCGGC TGGATATGCT GCAGAAAGGA
ACAGCCAGGG TGCGCATAGA ACCGCTGGAT CGTAATGTCA TTGACGGTGA GGCACCGCAG
GCTGTTGTTC CTGCCGCCAT TCGCAGAACT GCGCAGCGCA ACGCCACGGG TGATGAGCAG
AAGGCGGTAT CGCAGGCCGG AACCGCACCG GCTGGTGGTC AGACCGGTAC GGCGCAGCCC
GCTGCCGGAC AGCATGATTC TGCTGAGACA GCTGCTGCCG CTGGTGCAAC ACAGGCCGGT
ATGACCGCTG CGGTTTCACA GGGCCGGGCG GACAGTTCTG TTGCCGCCCC CATCGCAGAG
CGGGACGGCG TGGCTTCTCC GGACCATGCG CCGCAGGGCG GCAGCCATGC AAAAGAGCCG
GTGAAGGAAC AGCAGCCACA ACCGGCAGCT AACAGTACCC GTCAGGCGCT GGCTGTGGCG
GCTGCCATAA CCGGCGCAGA TCATGACAAA GCGGCGCACA AGACGGTACT GCCGGAAGAG
AGCGGCGTAC GAGACGGAAA TTATGTGAAA AAACTGCCAT CCGGCGTGTA TGTGCAGGCC
GGTGCATTCA GCAGACGCGA AAATGCGCGT AATTTCGCGC AACAGCTTGA AAAAGAAGGA
TTCGGACCGG TGTTGTGGAG TGCCAAAAAC AGTGCCGGAA GCCTGTGGCT GGTGGTTGCG
GGGCCGTTTG CAGATAAGGC GCAAGCCTAT AACAGACTTG CAGCATTGCG AAATGCGGGT
CACAATGGCT ACTTGAAAGT GGTTGCTCCA TAA
|
|---|
| Protein sequence | MRIRGCRSAA VLAAAALLWM LAAAGHAETV KTPPRLLEGM ASWYGEFFQG RPTASGEPFD
MNALTAAHMT LPLGSIVRVV NLENGKTVIV RINDRGPFKK QYVIDLSRQA AVRLDMLQKG
TARVRIEPLD RNVIDGEAPQ AVVPAAIRRT AQRNATGDEQ KAVSQAGTAP AGGQTGTAQP
AAGQHDSAET AAAAGATQAG MTAAVSQGRA DSSVAAPIAE RDGVASPDHA PQGGSHAKEP
VKEQQPQPAA NSTRQALAVA AAITGADHDK AAHKTVLPEE SGVRDGNYVK KLPSGVYVQA
GAFSRRENAR NFAQQLEKEG FGPVLWSAKN SAGSLWLVVA GPFADKAQAY NRLAALRNAG
HNGYLKVVAP
|
|---|
| |