| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0353 |
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| Symbol | |
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| ID | 3756363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | - |
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| Start bp | 342787 |
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| End bp | 344406 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637781213 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_386849 |
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| Protein GI | 78355400 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCGC TCAATTCCGC CGTGGATAAG GCAAAAACTT TCTGGACCCG CATCAGCATG
TCGCAGCGGG TATTCATCGT CGGCCTGACT GTGGTCGTGG TGGGCATATT TTTCGGCCTT
ATCTTCTGGA TAAATCAGCC CGACTACAGG GTGCTGTATT CCAAGCTTAC CCCGGAAGAC
GCCAACAGGG TGGTCACCGT GCTGCAGGCG CAGAAGGTCA GGTACCGGCT GGATAACGGC
GGCAGCACCA TAATGGTACC CGCCGACCGC GTGTACGACA TGCGGCTTAT GGTTGCCGGT
GAAGGTTCAG TGGTGGGACA GGGTGTCGGC TTTGAAATTT TTGACCAGAT CAAGGTCGGT
CAGACTGATT TTGTTCAGAA AATCAATTAC CAGCGCGCCC TGCAGGGCGA GCTTTCGCGT
ACCATAGCTG AATTTCCCGC TGTGGAGAGC GCCCGCGTGC ATCTGGTCAT TCCGCACCGC
AGCCTGTTCA TCGAAGAGCA GATGCAGCCT TCCGCTTCTG TGGTGCTGAA GCTGCAGGAC
GGCAAAAAGA TGGACGAAAA GGACGTGCAG GCCGTCGTCA ATCTGGTCAC CATGTCTGTG
GAAGGGCTGG ACCAGGGCAA AATTTCCGTG GCGGACACTT CGGGCAAGAT TCTGTACTAC
CCCAAAGACG AACAGTCGCT TGACGGCATG ACCTCCACCC AGCTGGAACA CAAGCTGACC
ATGCAGCAGA ATTTCGAACG CCGGATCGAA GAGCTGCTCT ACCCTGTCAT CGGCCCCGGC
AAAGTCATTG CCAAGGTCAA TGCCGATCTT GATTTTTCGC AGAAAACCAT CCGCAAAAAG
CTGTTTGACC CCGAAAGCTC TGTGGTACGC AGCGAAATAC GTACCGAAGA GGCCCGCAAA
GGCACGTCAA ACGTCAATGC CGGCGTGCCG GAAGCGAACT TCCGCGGCGA CGGCATGTCC
GGCGGCACCA GCACGGAAGA CTCCAACCGT GAAACCCGCA ACACCAACTA CGAAATAAAC
GAAGAAGAAC AGAATATCAT CGCTCCCGTG GGGCAGCTTG ACCGGCTGAG TGTTGCGGTT
ATCGTCGACG GCACGTATGA AAAGAACGAA GAAACGGGCG AATGGACATA TGTGCCGCGC
AGCGACGAAG AGGTGGCGCG CATCCGCCAG CTGGTGGCCA GTGCCGTCGG GTTCGACCGT
GCCCGCGGCG ATGTGCTGGA AGTCAGCAGC ATATCCTTCG GCGGGCCGGA AGCCGACACC
TACATGTCGC TGGCCGAAGT CATCATGGAC TACGCGCTGC GACTGGGTAA ACCCCTGCTG
AACGCGCTGC TGGTCTTCCT CTTCCTCGTC ATGGTGGTGC GGCCCGTGGT TCTGGCCCTC
ATACGGCCCA AGGTCGAAGG TGAAGTGGTC GAAGGCCTGG AAGGTCTGCC CACCGGCGAA
GAGCGTCTGG CCCTTATCGA GGGCGAAGAA GACATGGACG CCATGGACGC CCTGAAAAAA
ATCGACGATA TCAAAGCCCA TGCGCTGCAG CTTTCCGAAC AGAACATGGA ACAGGCAGTG
GGTATTCTGA AAAGCTGGCT GAAGGACAGC GAAGGAGCCA AAGTTGGCGG AGCAGCTTAA
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| Protein sequence | MTALNSAVDK AKTFWTRISM SQRVFIVGLT VVVVGIFFGL IFWINQPDYR VLYSKLTPED
ANRVVTVLQA QKVRYRLDNG GSTIMVPADR VYDMRLMVAG EGSVVGQGVG FEIFDQIKVG
QTDFVQKINY QRALQGELSR TIAEFPAVES ARVHLVIPHR SLFIEEQMQP SASVVLKLQD
GKKMDEKDVQ AVVNLVTMSV EGLDQGKISV ADTSGKILYY PKDEQSLDGM TSTQLEHKLT
MQQNFERRIE ELLYPVIGPG KVIAKVNADL DFSQKTIRKK LFDPESSVVR SEIRTEEARK
GTSNVNAGVP EANFRGDGMS GGTSTEDSNR ETRNTNYEIN EEEQNIIAPV GQLDRLSVAV
IVDGTYEKNE ETGEWTYVPR SDEEVARIRQ LVASAVGFDR ARGDVLEVSS ISFGGPEADT
YMSLAEVIMD YALRLGKPLL NALLVFLFLV MVVRPVVLAL IRPKVEGEVV EGLEGLPTGE
ERLALIEGEE DMDAMDALKK IDDIKAHALQ LSEQNMEQAV GILKSWLKDS EGAKVGGAA
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