Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1871 |
Symbol | |
ID | 8090467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 2226158 |
End bp | 2227237 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644835952 |
Product | ABC transporter related |
Protein accession | YP_002987486 |
Protein GI | 242239305 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.541718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGGT TGGAAGTGGT TCAAGCCCGG GTGGGTTATG GCGACGTTGC GGTTCTGAGA GGGATTTCTT TTGACGTGCA GGAGGGGGAA TTTGTCACTT TGCTGGGGCC GTCCGGCTGT GGCAAAACCA CATTGCTGCG GGCCATCGCC GGGTTTGTTC CACTCGACGA CGGCGCGATC CGCATCGGTG GCCGGGATAT GCAGGGTATC GCGCCGGAAA AACGTAACAC GGCGATGTGT TTTCAGTCCT ATGCGCTGTT CCCTCATTTG ACGGTGGCGG ACAACATCGC ATTCGGCCTG CGTCAACGCC GGGTTCCTTC GCCGCAGCAG CGGCAGCGGG TGGCGGAAAC CGCGCTAACG GTGGCGTTGA CCAACCATCT GGAAAAGCTG CCGGCGCAAC TTTCCGGCGG GCAGCAGCAG CGGGTGGCGC TGGCGCGGGC GATGGCGGTT CGTCCGGATG TTTTGCTGTT CGATGAGCCA TTGTCCAACC TGGATGCCCG ACTGCGCGAA CAATTGCGGT TACAGATCCG CGCGTTGCAG CGCCAATACG GGTTTACGGC GGTGTACGTC ACGCATGATC AGGCCGAAGC GCTGGCCATG TCCGACCGGG TGATCGTGAT GGAAGGCGGC TGCGTGGCGC AGATCGGGAC GCCTCAGGAG ATTTATCACC AGCCGGTTAG CCGGTTTGTC GCCGATTTTG TCGGCACCGC CAATATTATG GCGGGCACGA TCACCGACCG TGATGTCGGC GCCAGGCTTT ATCAGGTGCA GACGCCGCTG GGCGCGCTGA CGGTAAAATC GGATCAGCCG CCGGTGTCCG CGCGACCTTA TGTGTGCTGG CGACCGGAAG CGGCCGGGCT GCTGGAGCGG GGGGGCGGGG AGCCGAATGT GTTTGCGCTG CGTATCCGGC GCAATACCTT TCTTGGCAGC CAGACCGATG TGGAAGGCTC TCCGGAAGCG GGCGGCGATG TTTGCTTCCG GGTGCAATTG CCCGGTCATC GGACGCTGGC GGAAAACAGC ATCTGCCATT TCTTTTTGCC GCCGGATCAG TTGCGTTTTC TGCAGGAGGA CGCGGCATGA
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Protein sequence | MSRLEVVQAR VGYGDVAVLR GISFDVQEGE FVTLLGPSGC GKTTLLRAIA GFVPLDDGAI RIGGRDMQGI APEKRNTAMC FQSYALFPHL TVADNIAFGL RQRRVPSPQQ RQRVAETALT VALTNHLEKL PAQLSGGQQQ RVALARAMAV RPDVLLFDEP LSNLDARLRE QLRLQIRALQ RQYGFTAVYV THDQAEALAM SDRVIVMEGG CVAQIGTPQE IYHQPVSRFV ADFVGTANIM AGTITDRDVG ARLYQVQTPL GALTVKSDQP PVSARPYVCW RPEAAGLLER GGGEPNVFAL RIRRNTFLGS QTDVEGSPEA GGDVCFRVQL PGHRTLAENS ICHFFLPPDQ LRFLQEDAA
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